HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:28.9 nTPM
HPA Brain:15.8 nTPM
GTEx:28.9 nTPM
FANTOM5:48.7 Scaled Tags Per Million
Pig:31.2 nTPM
Mouse:44.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016552
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.8
Sample id Sample description nTPM
Hippocampus
nTPM: 14.9
1855 Male, age 76, left hemisphere 17.5
2529 Female, age 94, left hemisphere 17.4
1911 Female, age 85, right hemisphere 15.5
1898 Male, age 80, left hemisphere 15.0
2148 Female, age 91, left hemisphere 13.4
2621 Female, age 67, right hemisphere 10.7
Dentate gyrus
nTPM: 12.6
2010 Male, age 76, both hemispheres 16.0
2528 Male, age 74, both hemispheres 15.6
1927 Female, age 91, both hemispheres 13.8
2246 Female, age 85, both hemispheres 12.7
2530 Female, age 94, left hemisphere 10.3
2531 Female, age 67, both hemispheres 7.3
Entorhinal gyrus
nTPM: 11.5
2117 Female, age 91, right hemisphere 16.5
1938 Female, age 85, left hemisphere 13.9
1787 Male, age 76, left hemisphere 11.9
2764 Male, age 80, right hemisphere 10.8
2686 Male, age 75, right hemisphere 10.6
2613 Female, age 94, left hemisphere 5.4
Hippocampus, CA1
nTPM: 15.8
2749 Male, age 80, left hemisphere 18.0
1873 Female, age 85, both hemispheres 17.5
2527 Male, age 74, both hemispheres 15.8
2045 Male, age 76, both hemispheres 14.2
2082 Female, age 91, right hemisphere 13.3
Hippocampus, CA2
nTPM: 14.0
2249 Male, age 74, both hemispheres 17.5
1892 Male, age 76, both hemispheres 17.2
1963 Male, age 80, left hemisphere 15.2
1940 Female, age 85, left hemisphere 12.7
2113 Female, age 91, right hemisphere 12.4
2437 Female, age 94, left hemisphere 9.1
Hippocampus, CA3
nTPM: 13.4
2436 Male, age 74, both hemispheres 17.5
1867 Male, age 76, both hemispheres 16.3
1891 Female, age 85, both hemispheres 15.7
2137 Male, age 80, left hemisphere 13.3
2861 Female, age 67, both hemispheres 9.1
2620 Female, age 94, left hemisphere 8.4
Parahippocampal cortex
nTPM: 12.7
2692 Male, age 74, both hemispheres 16.0
2018 Male, age 76, both hemispheres 15.8
1933 Female, age 85, both hemispheres 14.0
1850 Male, age 80, both hemispheres 13.1
2250 Female, age 67, right hemisphere 13.1
1990 Female, age 91, right hemisphere 12.8
2245 Female, age 91, both hemispheres 11.0
2693 Female, age 94, both hemispheres 11.0
2622 Female, age 67, right hemisphere 10.4
2532 Female, age 72, left hemisphere 9.7
Perirhinal gyrus
nTPM: 13.0
1847 Female, age 91, left hemisphere 15.6
1841 Female, age 85, right hemisphere 15.1
1794 Male, age 80, right hemisphere 13.1
2521 Female, age 94, right hemisphere 11.3
2848 Male, age 76, right hemisphere 9.9
Subiculum
nTPM: 14.5
2619 Male, age 74, both hemispheres 14.9
2042 Male, age 76, both hemispheres 14.7
1901 Male, age 80, both hemispheres 14.6
2438 Female, age 94, left hemisphere 14.6
2729 Female, age 91, right hemisphere 14.2
1977 Female, age 85, both hemispheres 13.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.9
Samples: 197

Max nTPM: 67.1
Min nTPM: 14.8
Std nTPM: 8.5
Median nTPM: 27.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 67.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 62.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 58.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 54.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 51.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 47.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 47.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 46.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 46.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 45.1
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 44.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.7
FF:10169-103B7 60 years, female 58.1
FF:10153-102I9 76 years, female 39.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.2
Pig sample Sample description nTPM
Subiculum
nTPM: 27.2
Samples: 4

Max nTPM: 29.5
Min nTPM: 24.8
Sample A Female 28.4
Sample B Female 29.5
Sample C Male 25.9
Sample D Male 24.8
Dorsal hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 33.3
Min nTPM: 29.6
Sample A Female 33.3
Sample B Female 31.7
Sample C Male 29.6
Sample D Male 30.0
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 28.8
Min nTPM: 20.4
Sample A Female 20.4
Sample B Female 28.8
Sample C Male 26.5
Sample D Male 23.3
Ventral hippocampus
nTPM: 27.6
Samples: 4

Max nTPM: 32.0
Min nTPM: 23.3
Sample A Female 23.3
Sample B Female 25.8
Sample C Male 29.3
Sample D Male 32.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.1
Samples: 4

Max nTPM: 42.9
Min nTPM: 38.2
Sample A Male 42.9
Sample B Male 38.2
Sample C Female 40.5
Sample D Female 38.7
Hippocampal formation
nTPM: 44.4
Samples: 4

Max nTPM: 49.7
Min nTPM: 39.1
Sample A Male 49.7
Sample B Male 39.1
Sample C Female 41.5
Sample D Female 47.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71492910 Antisense, RP_050913_01_G07, Mouse strain C57BL/6J (56 days, male) 0.0

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