HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:220.7 nTPM
HPA Brain:144.3 nTPM
GTEx:220.7 nTPM
FANTOM5:252.9 Scaled Tags Per Million
Pig:185.6 nTPM
Mouse:76.4 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003440
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 144.3
Sample id Sample description nTPM
Hippocampus
nTPM: 137.0
1898 Male, age 80, left hemisphere 161.3
2529 Female, age 94, left hemisphere 146.2
2621 Female, age 67, right hemisphere 145.8
2148 Female, age 91, left hemisphere 126.9
1911 Female, age 85, right hemisphere 122.5
1855 Male, age 76, left hemisphere 119.4
Dentate gyrus
nTPM: 123.9
2530 Female, age 94, left hemisphere 172.5
2010 Male, age 76, both hemispheres 123.5
1927 Female, age 91, both hemispheres 122.0
2246 Female, age 85, both hemispheres 121.3
2531 Female, age 67, both hemispheres 108.1
2528 Male, age 74, both hemispheres 96.3
Entorhinal gyrus
nTPM: 127.7
2764 Male, age 80, right hemisphere 151.2
2613 Female, age 94, left hemisphere 131.1
1787 Male, age 76, left hemisphere 125.9
2117 Female, age 91, right hemisphere 123.9
1938 Female, age 85, left hemisphere 121.6
2686 Male, age 75, right hemisphere 112.5
Hippocampus, CA1
nTPM: 126.7
2749 Male, age 80, left hemisphere 174.0
2527 Male, age 74, both hemispheres 148.0
1873 Female, age 85, both hemispheres 123.9
2045 Male, age 76, both hemispheres 97.7
2082 Female, age 91, right hemisphere 89.9
Hippocampus, CA2
nTPM: 123.6
2437 Female, age 94, left hemisphere 163.4
1892 Male, age 76, both hemispheres 132.7
1963 Male, age 80, left hemisphere 119.5
1940 Female, age 85, left hemisphere 114.1
2249 Male, age 74, both hemispheres 110.1
2113 Female, age 91, right hemisphere 101.7
Hippocampus, CA3
nTPM: 144.3
2436 Male, age 74, both hemispheres 219.5
2861 Female, age 67, both hemispheres 159.2
2137 Male, age 80, left hemisphere 134.6
2620 Female, age 94, left hemisphere 133.3
1867 Male, age 76, both hemispheres 115.7
1891 Female, age 85, both hemispheres 103.7
Parahippocampal cortex
nTPM: 130.9
2245 Female, age 91, both hemispheres 180.0
2622 Female, age 67, right hemisphere 144.6
1990 Female, age 91, right hemisphere 134.7
2250 Female, age 67, right hemisphere 133.7
2692 Male, age 74, both hemispheres 133.3
2532 Female, age 72, left hemisphere 129.5
1933 Female, age 85, both hemispheres 127.1
1850 Male, age 80, both hemispheres 120.2
2018 Male, age 76, both hemispheres 107.3
2693 Female, age 94, both hemispheres 99.1
Perirhinal gyrus
nTPM: 120.8
1847 Female, age 91, left hemisphere 148.6
1794 Male, age 80, right hemisphere 137.1
2521 Female, age 94, right hemisphere 120.6
1841 Female, age 85, right hemisphere 104.1
2848 Male, age 76, right hemisphere 93.5
Subiculum
nTPM: 129.6
2438 Female, age 94, left hemisphere 158.6
2619 Male, age 74, both hemispheres 155.5
1901 Male, age 80, both hemispheres 140.7
1977 Female, age 85, both hemispheres 124.3
2042 Male, age 76, both hemispheres 105.9
2729 Female, age 91, right hemisphere 92.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 220.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 220.7
Samples: 197

Max nTPM: 529.9
Min nTPM: 55.7
Std nTPM: 86.9
Median nTPM: 209.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 529.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 470.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 452.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 446.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 433.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 421.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 410.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 404.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 391.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 390.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 386.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 252.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 252.9
FF:10153-102I9 76 years, female 257.7
FF:10169-103B7 60 years, female 248.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 185.6
Pig sample Sample description nTPM
Subiculum
nTPM: 153.1
Samples: 4

Max nTPM: 217.5
Min nTPM: 119.3
Sample A Female 217.5
Sample B Female 130.1
Sample C Male 145.4
Sample D Male 119.3
Dorsal hippocampus
nTPM: 185.6
Samples: 4

Max nTPM: 238.3
Min nTPM: 152.6
Sample A Female 238.3
Sample B Female 164.0
Sample C Male 187.5
Sample D Male 152.6
Entorhinal cortex
nTPM: 163.4
Samples: 4

Max nTPM: 176.0
Min nTPM: 140.7
Sample A Female 166.5
Sample B Female 176.0
Sample C Male 170.3
Sample D Male 140.7
Ventral hippocampus
nTPM: 181.0
Samples: 4

Max nTPM: 230.3
Min nTPM: 133.3
Sample A Female 197.6
Sample B Female 133.3
Sample C Male 230.3
Sample D Male 162.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 76.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.1
Samples: 4

Max nTPM: 82.2
Min nTPM: 60.0
Sample A Male 82.2
Sample B Male 81.4
Sample C Female 60.0
Sample D Female 68.8
Hippocampal formation
nTPM: 76.4
Samples: 4

Max nTPM: 105.0
Min nTPM: 61.7
Sample A Male 65.6
Sample B Male 73.3
Sample C Female 61.7
Sample D Female 105.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
75197594 Antisense, RP_060502_01_C04, Mouse strain C57BL/6J (56 days, male) 4.4

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