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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
171.1
nTPM
FANTOM5:
278.6
Scaled Tags Per Million
Pig:
247.3
nTPM
Allen mouse:
6.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
171.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 113.6
2301
Female, age 85, both hemispheres
133.0
1984
Male, age 76, both hemispheres
127.9
2188
Female, age 91, both hemispheres
106.5
2090
Male, age 80, both hemispheres
87.2
Dorsal cochlear nucleus nTPM: 118.4
2802
Male, age 74, right hemisphere
155.0
2187
Female, age 91, both hemispheres
133.6
2370
Male, age 61, both hemispheres
132.0
2058
Male, age 76, both hemispheres
88.4
2378
Male, age 80, both hemispheres
83.3
Dorsal tegmental nucleus nTPM: 136.0
2358
Male, age 61, both hemispheres
156.3
1936
Male, age 76, left hemisphere
142.6
2083
Male, age 80, both hemispheres
130.2
2326
Male, age 74, both hemispheres
115.0
Dorsolateral tegmental area nTPM: 118.1
2141
Male, age 76, both hemispheres
136.3
2654
Male, age 80, both hemispheres
132.1
2337
Male, age 61, both hemispheres
122.6
2751
Female, age 85, both hemispheres
115.6
2360
Male, age 74, both hemispheres
83.7
Kolliker-Fuse nucleus nTPM: 138.2
2163
Male, age 80, both hemispheres
176.2
2315
Male, age 76, right hemisphere
125.7
2793
Female, age 91, left hemisphere
112.7
Lateral lemniscal nuclei nTPM: 127.0
2169
Male, age 76, both hemispheres
154.8
2453
Male, age 74, right hemisphere
138.8
2036
Male, age 80, both hemispheres
132.2
2746
Female, age 85, left hemisphere
121.8
2320
Female, age 91, left hemisphere
87.2
Lateral parabrachial nucleus nTPM: 104.1
2139
Female, age 85, right hemisphere
141.5
2013
Male, age 80, both hemispheres
103.9
2792
Male, age 76, both hemispheres
88.5
2790
Male, age 61, both hemispheres
82.6
Lateral vestibular nucleus nTPM: 171.1
2184
Male, age 76, both hemispheres
192.1
2311
Male, age 80, both hemispheres
150.2
Locus coeruleus nTPM: 158.8
2123
Female, age 91, both hemispheres
182.1
2720
Male, age 74, both hemispheres
176.4
2014
Male, age 55, unknown
168.6
2162
Male, age 80, both hemispheres
150.9
2317
Female, age 72, unknown
148.6
1980
Male, age 76, both hemispheres
147.7
2788
Male, age 74, unknown
137.5
Medial parabrachial nucleus nTPM: 135.8
2170
Female, age 91, both hemispheres
153.0
2786
Male, age 76, both hemispheres
145.9
2854
Male, age 80, both hemispheres
143.4
2156
Male, age 61, both hemispheres
128.2
2463
Female, age 85, right hemisphere
108.6
Medial periolivary nuclei nTPM: 110.9
2171
Female, age 85, both hemispheres
167.9
2063
Male, age 76, both hemispheres
120.1
2791
Male, age 74, right hemisphere
91.7
2458
Female, age 91, both hemispheres
90.5
2081
Male, age 80, both hemispheres
84.5
Motor facial nucleus nTPM: 114.9
2062
Male, age 76, both hemispheres
132.8
2365
Male, age 74, right hemisphere
125.9
2697
Female, age 85, both hemispheres
116.4
2795
Female, age 91, both hemispheres
116.2
2126
Male, age 61, both hemispheres
103.4
2327
Male, age 80, both hemispheres
94.8
Motor trigeminal nucleus nTPM: 124.4
2335
Male, age 61, both hemispheres
165.9
2309
Male, age 76, both hemispheres
142.3
2560
Male, age 74, both hemispheres
117.6
2079
Male, age 80, both hemispheres
101.3
2321
Female, age 91, both hemispheres
95.1
Nuclei of the trapezoid body nTPM: 124.1
2735
Female, age 85, both hemispheres
153.3
1983
Male, age 76, both hemispheres
148.5
2159
Male, age 61, both hemispheres
132.8
2166
Male, age 80, both hemispheres
102.0
2368
Female, age 91, both hemispheres
83.8
Nucleus raphe magnus nTPM: 135.7
2172
Female, age 85, both hemispheres
164.7
2160
Male, age 61, both hemispheres
163.7
2051
Male, age 76, both hemispheres
153.2
2455
Male, age 74, both hemispheres
141.1
2328
Male, age 80, both hemispheres
116.4
2459
Female, age 91, both hemispheres
75.1
Paramedian reticular nucleus nTPM: 120.3
2313
Male, age 61, both hemispheres
147.8
2050
Female, age 85, both hemispheres
137.4
2057
Male, age 80, both hemispheres
98.3
2052
Male, age 76, both hemispheres
97.5
Pedunculopontine tegmental nucleus nTPM: 121.2
2334
Male, age 80, both hemispheres
135.4
1921
Female, age 85, both hemispheres
115.0
2338
Male, age 61, both hemispheres
113.2
Pontine nuclei nTPM: 128.8
2787
Female, age 85, both hemispheres
203.3
1863
Male, age 55, unknown
168.4
1968
Male, age 76, left hemisphere
145.3
2109
Female, age 72, unknown
119.4
2727
Male, age 61, right hemisphere
119.0
2115
Male, age 80, left hemisphere
106.8
2319
Female, age 91, both hemispheres
93.8
2454
Male, age 74, left hemisphere
74.4
Pontine raphe nucleus nTPM: 123.8
2853
Male, age 76, midline
145.2
2122
Female, age 85, midline
102.4
Posteroventral cochlear nucleus nTPM: 110.7
2070
Male, age 76, both hemispheres
125.5
2371
Male, age 61, both hemispheres
125.4
2752
Female, age 85, both hemispheres
120.1
2341
Male, age 80, both hemispheres
107.3
2135
Female, age 91, both hemispheres
75.0
Principal sensory trigeminal nucleus nTPM: 129.5
2324
Male, age 76, both hemispheres
192.9
2158
Male, age 61, both hemispheres
141.4
2008
Male, age 80, left hemisphere
107.3
2367
Female, age 91, left hemisphere
76.4
Reticular pontine nucleus, caudal nTPM: 113.8
2332
Male, age 80, right hemisphere
142.7
2092
Male, age 76, both hemispheres
129.3
2559
Male, age 74, both hemispheres
94.3
2457
Female, age 91, both hemispheres
89.1
Reticular pontine nucleus, oral nTPM: 122.3
2167
Male, age 76, both hemispheres
150.1
1939
Male, age 80, both hemispheres
141.0
2361
Male, age 74, both hemispheres
114.7
2012
Female, age 85, both hemispheres
108.5
2366
Female, age 91, both hemispheres
97.3
Reticulotegmental nucleus nTPM: 137.9
2325
Male, age 76, both hemispheres
156.1
2322
Female, age 91, both hemispheres
141.0
2452
Male, age 74, both hemispheres
128.3
2333
Male, age 80, both hemispheres
126.3
Spinal trigeminal nucleus, oral nTPM: 154.6
2164
Male, age 80, both hemispheres
171.8
2737
Female, age 85, both hemispheres
148.6
1978
Male, age 76, both hemispheres
143.3
Subcoeruleus area nTPM: 123.8
2323
Female, age 91, left hemisphere
175.5
1958
Male, age 80, both hemispheres
126.8
2451
Male, age 74, both hemispheres
121.8
2369
Female, age 85, left hemisphere
100.0
2089
Male, age 76, left hemisphere
94.8
Superior olive nTPM: 102.4
1875
Female, age 85, both hemispheres
111.2
2020
Male, age 76, both hemispheres
111.2
2561
Female, age 91, both hemispheres
105.9
2329
Male, age 80, right hemisphere
104.2
2364
Male, age 74, right hemisphere
79.6
Ventral periolivary nuclei nTPM: 109.8
2165
Male, age 80, both hemispheres
148.8
2794
Female, age 91, left hemisphere
99.1
2130
Female, age 85, both hemispheres
96.4
2023
Male, age 76, both hemispheres
94.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 119.1
2840
Female, age 85, both hemispheres
151.3
2449
Male, age 74, both hemispheres
132.7
1959
Male, age 76, both hemispheres
127.6
2161
Male, age 80, both hemispheres
127.1
2359
Male, age 61, both hemispheres
100.0
2456
Female, age 91, both hemispheres
75.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
247.3
Pig sample
Sample description
nTPM
Pons nTPM: 247.4
Samples: 4
Max nTPM: 305.3
Min nTPM: 175.3
Sample A
Female
290.8
Sample B
Female
175.3
Sample C
Male
218.0
Sample D
Male
305.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
