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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
381.7
nTPM
FANTOM5:
35.4
Scaled Tags Per Million
Pig:
323.1
nTPM
Allen mouse:
10.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
381.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 340.3
2090
Male, age 80, both hemispheres
395.2
2188
Female, age 91, both hemispheres
338.7
2301
Female, age 85, both hemispheres
329.4
1984
Male, age 76, both hemispheres
297.7
Dorsal cochlear nucleus nTPM: 351.1
2802
Male, age 74, right hemisphere
413.0
2378
Male, age 80, both hemispheres
369.6
2187
Female, age 91, both hemispheres
366.4
2058
Male, age 76, both hemispheres
309.3
2370
Male, age 61, both hemispheres
297.1
Dorsal tegmental nucleus nTPM: 348.4
2083
Male, age 80, both hemispheres
371.1
2326
Male, age 74, both hemispheres
362.0
2358
Male, age 61, both hemispheres
350.2
1936
Male, age 76, left hemisphere
310.4
Dorsolateral tegmental area nTPM: 361.8
2337
Male, age 61, both hemispheres
467.5
2654
Male, age 80, both hemispheres
389.1
2360
Male, age 74, both hemispheres
322.2
2141
Male, age 76, both hemispheres
320.7
2751
Female, age 85, both hemispheres
309.6
Kolliker-Fuse nucleus nTPM: 349.4
2315
Male, age 76, right hemisphere
407.4
2163
Male, age 80, both hemispheres
333.5
2793
Female, age 91, left hemisphere
307.4
Lateral lemniscal nuclei nTPM: 304.6
2746
Female, age 85, left hemisphere
353.8
2169
Male, age 76, both hemispheres
352.3
2036
Male, age 80, both hemispheres
284.1
2453
Male, age 74, right hemisphere
273.5
2320
Female, age 91, left hemisphere
259.4
Lateral parabrachial nucleus nTPM: 381.7
2013
Male, age 80, both hemispheres
425.7
2139
Female, age 85, right hemisphere
402.2
2792
Male, age 76, both hemispheres
387.6
2790
Male, age 61, both hemispheres
311.3
Lateral vestibular nucleus nTPM: 363.0
2311
Male, age 80, both hemispheres
408.0
2184
Male, age 76, both hemispheres
318.1
Locus coeruleus nTPM: 353.0
2123
Female, age 91, both hemispheres
387.3
2014
Male, age 55, unknown
371.4
2317
Female, age 72, unknown
366.8
2720
Male, age 74, both hemispheres
346.2
2162
Male, age 80, both hemispheres
339.5
2788
Male, age 74, unknown
334.4
1980
Male, age 76, both hemispheres
325.3
Medial parabrachial nucleus nTPM: 336.0
2170
Female, age 91, both hemispheres
401.2
2854
Male, age 80, both hemispheres
346.4
2786
Male, age 76, both hemispheres
314.3
2156
Male, age 61, both hemispheres
311.5
2463
Female, age 85, right hemisphere
306.8
Medial periolivary nuclei nTPM: 337.0
2063
Male, age 76, both hemispheres
409.8
2171
Female, age 85, both hemispheres
345.3
2081
Male, age 80, both hemispheres
344.8
2791
Male, age 74, right hemisphere
315.6
2458
Female, age 91, both hemispheres
269.6
Motor facial nucleus nTPM: 325.5
2062
Male, age 76, both hemispheres
413.5
2795
Female, age 91, both hemispheres
331.3
2365
Male, age 74, right hemisphere
327.7
2126
Male, age 61, both hemispheres
327.1
2697
Female, age 85, both hemispheres
313.1
2327
Male, age 80, both hemispheres
240.1
Motor trigeminal nucleus nTPM: 305.7
2335
Male, age 61, both hemispheres
329.0
2309
Male, age 76, both hemispheres
320.7
2079
Male, age 80, both hemispheres
302.4
2560
Male, age 74, both hemispheres
294.9
2321
Female, age 91, both hemispheres
281.3
Nuclei of the trapezoid body nTPM: 330.3
1983
Male, age 76, both hemispheres
454.4
2735
Female, age 85, both hemispheres
329.9
2159
Male, age 61, both hemispheres
326.2
2166
Male, age 80, both hemispheres
287.9
2368
Female, age 91, both hemispheres
253.2
Nucleus raphe magnus nTPM: 321.7
2051
Male, age 76, both hemispheres
384.8
2160
Male, age 61, both hemispheres
362.2
2172
Female, age 85, both hemispheres
345.3
2455
Male, age 74, both hemispheres
295.2
2328
Male, age 80, both hemispheres
275.2
2459
Female, age 91, both hemispheres
267.6
Paramedian reticular nucleus nTPM: 337.4
2050
Female, age 85, both hemispheres
359.8
2052
Male, age 76, both hemispheres
348.6
2057
Male, age 80, both hemispheres
337.4
2313
Male, age 61, both hemispheres
303.6
Pedunculopontine tegmental nucleus nTPM: 346.6
2338
Male, age 61, both hemispheres
411.9
2334
Male, age 80, both hemispheres
356.8
1921
Female, age 85, both hemispheres
271.2
Pontine nuclei nTPM: 350.4
2787
Female, age 85, both hemispheres
421.9
1863
Male, age 55, unknown
390.6
1968
Male, age 76, left hemisphere
381.1
2109
Female, age 72, unknown
346.5
2727
Male, age 61, right hemisphere
341.9
2115
Male, age 80, left hemisphere
339.9
2319
Female, age 91, both hemispheres
321.0
2454
Male, age 74, left hemisphere
260.7
Pontine raphe nucleus nTPM: 336.1
2122
Female, age 85, midline
341.1
2853
Male, age 76, midline
331.1
Posteroventral cochlear nucleus nTPM: 354.2
2341
Male, age 80, both hemispheres
416.3
2135
Female, age 91, both hemispheres
369.4
2371
Male, age 61, both hemispheres
332.9
2752
Female, age 85, both hemispheres
332.8
2070
Male, age 76, both hemispheres
319.7
Principal sensory trigeminal nucleus nTPM: 303.7
2158
Male, age 61, both hemispheres
349.1
2324
Male, age 76, both hemispheres
305.8
2008
Male, age 80, left hemisphere
280.2
2367
Female, age 91, left hemisphere
279.5
Reticular pontine nucleus, caudal nTPM: 301.7
2092
Male, age 76, both hemispheres
391.7
2559
Male, age 74, both hemispheres
288.8
2457
Female, age 91, both hemispheres
288.4
2332
Male, age 80, right hemisphere
237.8
Reticular pontine nucleus, oral nTPM: 312.0
1939
Male, age 80, both hemispheres
325.5
2167
Male, age 76, both hemispheres
322.0
2012
Female, age 85, both hemispheres
319.4
2361
Male, age 74, both hemispheres
307.7
2366
Female, age 91, both hemispheres
285.4
Reticulotegmental nucleus nTPM: 322.0
2325
Male, age 76, both hemispheres
343.8
2452
Male, age 74, both hemispheres
333.9
2333
Male, age 80, both hemispheres
311.4
2322
Female, age 91, both hemispheres
299.0
Spinal trigeminal nucleus, oral nTPM: 308.8
2164
Male, age 80, both hemispheres
335.7
1978
Male, age 76, both hemispheres
298.9
2737
Female, age 85, both hemispheres
291.9
Subcoeruleus area nTPM: 330.9
2451
Male, age 74, both hemispheres
369.4
1958
Male, age 80, both hemispheres
335.9
2369
Female, age 85, left hemisphere
322.4
2089
Male, age 76, left hemisphere
315.9
2323
Female, age 91, left hemisphere
311.2
Superior olive nTPM: 318.0
2020
Male, age 76, both hemispheres
385.0
1875
Female, age 85, both hemispheres
342.9
2364
Male, age 74, right hemisphere
310.6
2561
Female, age 91, both hemispheres
286.7
2329
Male, age 80, right hemisphere
265.1
Ventral periolivary nuclei nTPM: 331.2
2023
Male, age 76, both hemispheres
379.9
2165
Male, age 80, both hemispheres
325.7
2130
Female, age 85, both hemispheres
318.1
2794
Female, age 91, left hemisphere
301.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 322.6
2359
Male, age 61, both hemispheres
382.4
1959
Male, age 76, both hemispheres
348.6
2840
Female, age 85, both hemispheres
334.1
2161
Male, age 80, both hemispheres
331.8
2449
Male, age 74, both hemispheres
279.7
2456
Female, age 91, both hemispheres
258.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
323.1
Pig sample
Sample description
nTPM
Pons nTPM: 323.1
Samples: 4
Max nTPM: 366.7
Min nTPM: 239.8
Sample A
Female
320.3
Sample B
Female
239.8
Sample C
Male
366.7
Sample D
Male
365.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
