HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:23.6 nTPM
HPA Brain:15.3 nTPM
GTEx:23.6 nTPM
FANTOM5:24.3 Scaled Tags Per Million
Pig:40.5 nTPM
Mouse:18.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045700
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.3
Sample id Sample description nTPM
Hippocampus
nTPM: 12.9
1898 Male, age 80, left hemisphere 15.1
1855 Male, age 76, left hemisphere 14.4
2621 Female, age 67, right hemisphere 13.4
2148 Female, age 91, left hemisphere 13.2
2529 Female, age 94, left hemisphere 11.3
1911 Female, age 85, right hemisphere 10.1
Dentate gyrus
nTPM: 12.8
1927 Female, age 91, both hemispheres 17.1
2530 Female, age 94, left hemisphere 13.6
2010 Male, age 76, both hemispheres 12.7
2531 Female, age 67, both hemispheres 11.4
2246 Female, age 85, both hemispheres 11.2
2528 Male, age 74, both hemispheres 10.8
Entorhinal gyrus
nTPM: 13.4
2764 Male, age 80, right hemisphere 15.5
1938 Female, age 85, left hemisphere 14.2
2686 Male, age 75, right hemisphere 14.2
2613 Female, age 94, left hemisphere 13.3
1787 Male, age 76, left hemisphere 12.1
2117 Female, age 91, right hemisphere 11.0
Hippocampus, CA1
nTPM: 13.5
2749 Male, age 80, left hemisphere 23.5
2527 Male, age 74, both hemispheres 11.8
1873 Female, age 85, both hemispheres 10.9
2082 Female, age 91, right hemisphere 10.8
2045 Male, age 76, both hemispheres 10.4
Hippocampus, CA2
nTPM: 12.7
1963 Male, age 80, left hemisphere 16.9
1892 Male, age 76, both hemispheres 16.1
2113 Female, age 91, right hemisphere 11.3
2437 Female, age 94, left hemisphere 11.3
1940 Female, age 85, left hemisphere 10.7
2249 Male, age 74, both hemispheres 9.8
Hippocampus, CA3
nTPM: 13.6
2137 Male, age 80, left hemisphere 18.2
2620 Female, age 94, left hemisphere 15.5
1867 Male, age 76, both hemispheres 15.1
2861 Female, age 67, both hemispheres 13.1
1891 Female, age 85, both hemispheres 10.0
2436 Male, age 74, both hemispheres 9.6
Parahippocampal cortex
nTPM: 13.4
1990 Female, age 91, right hemisphere 15.5
1850 Male, age 80, both hemispheres 15.2
2245 Female, age 91, both hemispheres 13.8
2250 Female, age 67, right hemisphere 13.6
2692 Male, age 74, both hemispheres 13.5
1933 Female, age 85, both hemispheres 12.7
2693 Female, age 94, both hemispheres 12.7
2532 Female, age 72, left hemisphere 12.5
2018 Male, age 76, both hemispheres 12.2
2622 Female, age 67, right hemisphere 11.9
Perirhinal gyrus
nTPM: 15.3
1847 Female, age 91, left hemisphere 18.3
1794 Male, age 80, right hemisphere 16.7
1841 Female, age 85, right hemisphere 15.9
2521 Female, age 94, right hemisphere 12.8
2848 Male, age 76, right hemisphere 12.7
Subiculum
nTPM: 12.1
2438 Female, age 94, left hemisphere 15.5
1977 Female, age 85, both hemispheres 13.9
1901 Male, age 80, both hemispheres 13.7
2619 Male, age 74, both hemispheres 11.4
2729 Female, age 91, right hemisphere 9.7
2042 Male, age 76, both hemispheres 8.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.6
Samples: 197

Max nTPM: 61.4
Min nTPM: 7.9
Std nTPM: 9.3
Median nTPM: 23.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 61.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 58.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 46.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 45.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 44.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 42.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 40.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 40.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 40.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 39.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 39.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.3
FF:10153-102I9 76 years, female 28.0
FF:10169-103B7 60 years, female 20.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.5
Pig sample Sample description nTPM
Subiculum
nTPM: 33.4
Samples: 4

Max nTPM: 37.2
Min nTPM: 29.5
Sample A Female 37.2
Sample B Female 34.5
Sample C Male 32.4
Sample D Male 29.5
Dorsal hippocampus
nTPM: 39.7
Samples: 4

Max nTPM: 48.1
Min nTPM: 33.1
Sample A Female 48.1
Sample B Female 40.0
Sample C Male 37.7
Sample D Male 33.1
Entorhinal cortex
nTPM: 35.0
Samples: 4

Max nTPM: 39.0
Min nTPM: 32.1
Sample A Female 32.1
Sample B Female 39.0
Sample C Male 36.3
Sample D Male 32.5
Ventral hippocampus
nTPM: 40.5
Samples: 4

Max nTPM: 47.1
Min nTPM: 29.4
Sample A Female 41.5
Sample B Female 29.4
Sample C Male 47.1
Sample D Male 43.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.5
Samples: 4

Max nTPM: 18.0
Min nTPM: 15.2
Sample A Male 15.9
Sample B Male 15.2
Sample C Female 16.7
Sample D Female 18.0
Hippocampal formation
nTPM: 18.0
Samples: 4

Max nTPM: 19.6
Min nTPM: 16.2
Sample A Male 19.4
Sample B Male 16.2
Sample C Female 16.8
Sample D Female 19.6

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