HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:14.1 nTPM
HPA Brain:14.3 nTPM
GTEx:14.1 nTPM
FANTOM5:91.7 Scaled Tags Per Million
Pig:61.4 nTPM
Mouse:102.8 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Hippocampus
nTPM: 12.3
1855 Male, age 76, left hemisphere 15.1
1898 Male, age 80, left hemisphere 14.8
2529 Female, age 94, left hemisphere 12.1
2621 Female, age 67, right hemisphere 10.9
1911 Female, age 85, right hemisphere 10.6
2148 Female, age 91, left hemisphere 10.1
Dentate gyrus
nTPM: 12.2
2530 Female, age 94, left hemisphere 15.6
2010 Male, age 76, both hemispheres 15.4
2246 Female, age 85, both hemispheres 12.3
1927 Female, age 91, both hemispheres 11.8
2531 Female, age 67, both hemispheres 10.2
2528 Male, age 74, both hemispheres 8.1
Entorhinal gyrus
nTPM: 12.2
1938 Female, age 85, left hemisphere 13.6
2764 Male, age 80, right hemisphere 13.0
1787 Male, age 76, left hemisphere 12.1
2613 Female, age 94, left hemisphere 12.0
2686 Male, age 75, right hemisphere 12.0
2117 Female, age 91, right hemisphere 10.6
Hippocampus, CA1
nTPM: 14.3
2749 Male, age 80, left hemisphere 23.4
1873 Female, age 85, both hemispheres 15.0
2045 Male, age 76, both hemispheres 12.9
2082 Female, age 91, right hemisphere 10.4
2527 Male, age 74, both hemispheres 9.9
Hippocampus, CA2
nTPM: 13.1
1963 Male, age 80, left hemisphere 18.9
1892 Male, age 76, both hemispheres 18.0
2437 Female, age 94, left hemisphere 11.5
1940 Female, age 85, left hemisphere 10.3
2113 Female, age 91, right hemisphere 9.9
2249 Male, age 74, both hemispheres 9.8
Hippocampus, CA3
nTPM: 12.1
2137 Male, age 80, left hemisphere 16.9
1867 Male, age 76, both hemispheres 14.5
2620 Female, age 94, left hemisphere 10.8
1891 Female, age 85, both hemispheres 10.6
2861 Female, age 67, both hemispheres 9.9
2436 Male, age 74, both hemispheres 9.6
Parahippocampal cortex
nTPM: 10.9
1850 Male, age 80, both hemispheres 13.5
1933 Female, age 85, both hemispheres 12.4
2245 Female, age 91, both hemispheres 11.8
1990 Female, age 91, right hemisphere 11.6
2532 Female, age 72, left hemisphere 11.5
2018 Male, age 76, both hemispheres 10.3
2692 Male, age 74, both hemispheres 9.9
2622 Female, age 67, right hemisphere 9.5
2693 Female, age 94, both hemispheres 9.3
2250 Female, age 67, right hemisphere 9.0
Perirhinal gyrus
nTPM: 12.2
1847 Female, age 91, left hemisphere 13.1
1794 Male, age 80, right hemisphere 12.9
1841 Female, age 85, right hemisphere 12.5
2848 Male, age 76, right hemisphere 11.9
2521 Female, age 94, right hemisphere 10.7
Subiculum
nTPM: 11.5
1901 Male, age 80, both hemispheres 13.2
2438 Female, age 94, left hemisphere 13.0
1977 Female, age 85, both hemispheres 12.9
2042 Male, age 76, both hemispheres 12.3
2729 Female, age 91, right hemisphere 8.9
2619 Male, age 74, both hemispheres 8.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.1
Samples: 197

Max nTPM: 30.9
Min nTPM: 3.5
Std nTPM: 3.6
Median nTPM: 13.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 30.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 25.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 23.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 23.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 23.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 23.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 21.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 21.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 20.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 20.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 20.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 91.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 91.7
FF:10169-103B7 60 years, female 113.2
FF:10153-102I9 76 years, female 70.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.4
Pig sample Sample description nTPM
Subiculum
nTPM: 42.0
Samples: 4

Max nTPM: 53.0
Min nTPM: 28.8
Sample A Female 53.0
Sample B Female 28.8
Sample C Male 50.7
Sample D Male 35.6
Dorsal hippocampus
nTPM: 61.4
Samples: 4

Max nTPM: 77.8
Min nTPM: 45.4
Sample A Female 70.2
Sample B Female 52.1
Sample C Male 77.8
Sample D Male 45.4
Entorhinal cortex
nTPM: 45.7
Samples: 4

Max nTPM: 61.8
Min nTPM: 35.2
Sample A Female 61.8
Sample B Female 35.2
Sample C Male 35.5
Sample D Male 50.3
Ventral hippocampus
nTPM: 49.0
Samples: 4

Max nTPM: 55.9
Min nTPM: 30.6
Sample A Female 55.9
Sample B Female 30.6
Sample C Male 54.2
Sample D Male 55.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 102.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.9
Samples: 4

Max nTPM: 110.1
Min nTPM: 87.5
Sample A Male 107.0
Sample B Male 110.1
Sample C Female 106.8
Sample D Female 87.5
Hippocampal formation
nTPM: 97.6
Samples: 4

Max nTPM: 104.6
Min nTPM: 93.4
Sample A Male 104.6
Sample B Male 97.2
Sample C Female 95.2
Sample D Female 93.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
71022918 Antisense, RP_050719_01_G10, Mouse strain C57BL/6J (56 days, male) 4.0

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