HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:30.8 nTPM
HPA Brain:43.2 nTPM
GTEx:30.8 nTPM
FANTOM5:79.2 Scaled Tags Per Million
Pig:61.9 nTPM
Mouse:95.6 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040072
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.2
Sample id Sample description nTPM
Hippocampus
nTPM: 40.6
1898 Male, age 80, left hemisphere 45.4
1911 Female, age 85, right hemisphere 42.6
2529 Female, age 94, left hemisphere 41.5
1855 Male, age 76, left hemisphere 40.9
2621 Female, age 67, right hemisphere 37.4
2148 Female, age 91, left hemisphere 35.9
Dentate gyrus
nTPM: 39.3
2246 Female, age 85, both hemispheres 42.1
2528 Male, age 74, both hemispheres 42.0
2010 Male, age 76, both hemispheres 41.6
2530 Female, age 94, left hemisphere 37.8
1927 Female, age 91, both hemispheres 37.4
2531 Female, age 67, both hemispheres 35.0
Entorhinal gyrus
nTPM: 38.8
1938 Female, age 85, left hemisphere 45.5
2117 Female, age 91, right hemisphere 42.3
2764 Male, age 80, right hemisphere 40.0
2613 Female, age 94, left hemisphere 35.0
2686 Male, age 75, right hemisphere 35.0
1787 Male, age 76, left hemisphere 34.9
Hippocampus, CA1
nTPM: 40.6
1873 Female, age 85, both hemispheres 45.0
2082 Female, age 91, right hemisphere 40.7
2749 Male, age 80, left hemisphere 39.9
2527 Male, age 74, both hemispheres 39.7
2045 Male, age 76, both hemispheres 37.5
Hippocampus, CA2
nTPM: 41.0
1940 Female, age 85, left hemisphere 43.3
1963 Male, age 80, left hemisphere 42.6
2249 Male, age 74, both hemispheres 41.7
2113 Female, age 91, right hemisphere 40.6
1892 Male, age 76, both hemispheres 40.5
2437 Female, age 94, left hemisphere 37.4
Hippocampus, CA3
nTPM: 37.1
1891 Female, age 85, both hemispheres 44.7
2137 Male, age 80, left hemisphere 40.6
1867 Male, age 76, both hemispheres 37.4
2436 Male, age 74, both hemispheres 36.8
2620 Female, age 94, left hemisphere 33.0
2861 Female, age 67, both hemispheres 30.0
Parahippocampal cortex
nTPM: 40.4
1933 Female, age 85, both hemispheres 46.3
1850 Male, age 80, both hemispheres 43.0
2018 Male, age 76, both hemispheres 42.6
2250 Female, age 67, right hemisphere 42.3
2532 Female, age 72, left hemisphere 41.2
1990 Female, age 91, right hemisphere 40.7
2692 Male, age 74, both hemispheres 40.6
2693 Female, age 94, both hemispheres 39.5
2245 Female, age 91, both hemispheres 36.7
2622 Female, age 67, right hemisphere 31.3
Perirhinal gyrus
nTPM: 40.0
1841 Female, age 85, right hemisphere 45.1
1794 Male, age 80, right hemisphere 41.0
2521 Female, age 94, right hemisphere 40.8
2848 Male, age 76, right hemisphere 37.9
1847 Female, age 91, left hemisphere 35.2
Subiculum
nTPM: 43.2
2438 Female, age 94, left hemisphere 47.7
2042 Male, age 76, both hemispheres 44.3
2729 Female, age 91, right hemisphere 44.2
1901 Male, age 80, both hemispheres 43.4
1977 Female, age 85, both hemispheres 41.9
2619 Male, age 74, both hemispheres 37.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.8
Samples: 197

Max nTPM: 74.2
Min nTPM: 18.0
Std nTPM: 6.2
Median nTPM: 30.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 74.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 47.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 46.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 45.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 43.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 41.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 41.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 41.1
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 40.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 40.8
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 40.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.2
FF:10169-103B7 60 years, female 89.3
FF:10153-102I9 76 years, female 69.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.9
Pig sample Sample description nTPM
Subiculum
nTPM: 55.1
Samples: 4

Max nTPM: 80.9
Min nTPM: 38.7
Sample A Female 80.9
Sample B Female 47.2
Sample C Male 53.7
Sample D Male 38.7
Dorsal hippocampus
nTPM: 61.9
Samples: 4

Max nTPM: 78.8
Min nTPM: 44.0
Sample A Female 78.8
Sample B Female 48.5
Sample C Male 76.4
Sample D Male 44.0
Entorhinal cortex
nTPM: 57.6
Samples: 4

Max nTPM: 68.7
Min nTPM: 47.1
Sample A Female 68.7
Sample B Female 66.9
Sample C Male 47.1
Sample D Male 47.8
Ventral hippocampus
nTPM: 54.9
Samples: 4

Max nTPM: 63.3
Min nTPM: 48.2
Sample A Female 63.3
Sample B Female 48.2
Sample C Male 53.4
Sample D Male 54.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 95.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.1
Samples: 4

Max nTPM: 91.3
Min nTPM: 81.2
Sample A Male 85.4
Sample B Male 91.3
Sample C Female 90.6
Sample D Female 81.2
Hippocampal formation
nTPM: 95.6
Samples: 4

Max nTPM: 109.2
Min nTPM: 82.7
Sample A Male 109.2
Sample B Male 82.7
Sample C Female 97.4
Sample D Female 93.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
69169511 Antisense, RP_050321_03_G01, Mouse strain C57BL/6J (56 days, male) 4.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org