HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:20.6 nTPM
HPA Brain:23.7 nTPM
GTEx:20.6 nTPM
FANTOM5:51.2 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:25.1 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041657Antibody HPA053586
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.7
Sample id Sample description nTPM
Hippocampus
nTPM: 19.5
1855 Male, age 76, left hemisphere 28.9
2529 Female, age 94, left hemisphere 20.6
1898 Male, age 80, left hemisphere 17.5
1911 Female, age 85, right hemisphere 17.1
2148 Female, age 91, left hemisphere 17.0
2621 Female, age 67, right hemisphere 15.9
Dentate gyrus
nTPM: 23.7
2530 Female, age 94, left hemisphere 31.9
2010 Male, age 76, both hemispheres 27.5
2528 Male, age 74, both hemispheres 23.7
2531 Female, age 67, both hemispheres 20.4
2246 Female, age 85, both hemispheres 20.2
1927 Female, age 91, both hemispheres 18.4
Entorhinal gyrus
nTPM: 16.5
2117 Female, age 91, right hemisphere 23.6
2764 Male, age 80, right hemisphere 20.8
1787 Male, age 76, left hemisphere 19.5
2613 Female, age 94, left hemisphere 12.3
1938 Female, age 85, left hemisphere 12.0
2686 Male, age 75, right hemisphere 11.0
Hippocampus, CA1
nTPM: 22.9
2749 Male, age 80, left hemisphere 36.1
2527 Male, age 74, both hemispheres 20.4
1873 Female, age 85, both hemispheres 20.1
2045 Male, age 76, both hemispheres 19.4
2082 Female, age 91, right hemisphere 18.3
Hippocampus, CA2
nTPM: 22.5
2437 Female, age 94, left hemisphere 28.2
1963 Male, age 80, left hemisphere 27.1
1892 Male, age 76, both hemispheres 22.0
2113 Female, age 91, right hemisphere 20.5
1940 Female, age 85, left hemisphere 19.5
2249 Male, age 74, both hemispheres 17.9
Hippocampus, CA3
nTPM: 21.0
2620 Female, age 94, left hemisphere 25.9
1867 Male, age 76, both hemispheres 24.2
1891 Female, age 85, both hemispheres 22.0
2137 Male, age 80, left hemisphere 19.8
2436 Male, age 74, both hemispheres 19.5
2861 Female, age 67, both hemispheres 14.9
Parahippocampal cortex
nTPM: 14.8
2532 Female, age 72, left hemisphere 23.1
2245 Female, age 91, both hemispheres 20.2
2018 Male, age 76, both hemispheres 17.1
1933 Female, age 85, both hemispheres 16.2
1990 Female, age 91, right hemisphere 14.7
2692 Male, age 74, both hemispheres 13.5
2622 Female, age 67, right hemisphere 11.9
2250 Female, age 67, right hemisphere 11.8
1850 Male, age 80, both hemispheres 9.8
2693 Female, age 94, both hemispheres 9.7
Perirhinal gyrus
nTPM: 15.1
1841 Female, age 85, right hemisphere 19.9
2521 Female, age 94, right hemisphere 17.6
1847 Female, age 91, left hemisphere 14.0
1794 Male, age 80, right hemisphere 12.8
2848 Male, age 76, right hemisphere 11.2
Subiculum
nTPM: 20.1
1901 Male, age 80, both hemispheres 26.2
2042 Male, age 76, both hemispheres 25.9
1977 Female, age 85, both hemispheres 23.5
2729 Female, age 91, right hemisphere 22.5
2619 Male, age 74, both hemispheres 15.8
2438 Female, age 94, left hemisphere 7.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.6
Samples: 197

Max nTPM: 45.3
Min nTPM: 7.2
Std nTPM: 6.8
Median nTPM: 19.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 45.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 43.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 36.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 35.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 34.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 33.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 33.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 32.8
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 32.2
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 31.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.2
FF:10153-102I9 76 years, female 56.7
FF:10169-103B7 60 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.8
Pig sample Sample description nTPM
Subiculum
nTPM: 12.1
Samples: 4

Max nTPM: 13.3
Min nTPM: 11.0
Sample A Female 13.3
Sample B Female 11.0
Sample C Male 12.6
Sample D Male 11.3
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 17.7
Min nTPM: 13.4
Sample A Female 17.7
Sample B Female 15.0
Sample C Male 17.1
Sample D Male 13.4
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.6
Sample A Female 12.0
Sample B Female 9.6
Sample C Male 12.4
Sample D Male 10.5
Ventral hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 19.6
Min nTPM: 9.4
Sample A Female 12.1
Sample B Female 9.4
Sample C Male 17.3
Sample D Male 19.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 22.7
Min nTPM: 19.6
Sample A Male 21.3
Sample B Male 21.7
Sample C Female 19.6
Sample D Female 22.7
Hippocampal formation
nTPM: 25.1
Samples: 4

Max nTPM: 27.4
Min nTPM: 23.0
Sample A Male 23.0
Sample B Male 24.9
Sample C Female 27.4
Sample D Female 25.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
69116572 Antisense, RP_050317_02_H07, Mouse strain C57BL/6J (56 days, male) 5.8

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