HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:42.3 nTPM
HPA Brain:41.8 nTPM
GTEx:42.3 nTPM
FANTOM5:2.8 Scaled Tags Per Million
Mouse:111.5 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031408
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.8
Sample id Sample description nTPM
Hippocampus
nTPM: 37.3
1898 Male, age 80, left hemisphere 49.2
1855 Male, age 76, left hemisphere 39.1
2621 Female, age 67, right hemisphere 36.4
2529 Female, age 94, left hemisphere 35.5
2148 Female, age 91, left hemisphere 32.6
1911 Female, age 85, right hemisphere 31.3
Dentate gyrus
nTPM: 34.9
1927 Female, age 91, both hemispheres 41.6
2010 Male, age 76, both hemispheres 40.1
2528 Male, age 74, both hemispheres 34.4
2246 Female, age 85, both hemispheres 34.3
2530 Female, age 94, left hemisphere 32.6
2531 Female, age 67, both hemispheres 26.3
Entorhinal gyrus
nTPM: 33.5
2764 Male, age 80, right hemisphere 39.0
1938 Female, age 85, left hemisphere 36.5
2117 Female, age 91, right hemisphere 35.4
1787 Male, age 76, left hemisphere 32.2
2613 Female, age 94, left hemisphere 29.3
2686 Male, age 75, right hemisphere 28.8
Hippocampus, CA1
nTPM: 40.0
2749 Male, age 80, left hemisphere 55.2
1873 Female, age 85, both hemispheres 42.0
2527 Male, age 74, both hemispheres 37.5
2045 Male, age 76, both hemispheres 32.7
2082 Female, age 91, right hemisphere 32.7
Hippocampus, CA2
nTPM: 37.7
1892 Male, age 76, both hemispheres 45.7
1963 Male, age 80, left hemisphere 43.5
2249 Male, age 74, both hemispheres 37.6
2437 Female, age 94, left hemisphere 35.5
1940 Female, age 85, left hemisphere 32.1
2113 Female, age 91, right hemisphere 31.7
Hippocampus, CA3
nTPM: 36.9
2436 Male, age 74, both hemispheres 47.8
2137 Male, age 80, left hemisphere 45.9
1867 Male, age 76, both hemispheres 38.9
1891 Female, age 85, both hemispheres 35.3
2620 Female, age 94, left hemisphere 28.4
2861 Female, age 67, both hemispheres 25.4
Parahippocampal cortex
nTPM: 36.5
1850 Male, age 80, both hemispheres 47.6
1990 Female, age 91, right hemisphere 38.9
2532 Female, age 72, left hemisphere 38.9
2245 Female, age 91, both hemispheres 38.6
1933 Female, age 85, both hemispheres 37.1
2250 Female, age 67, right hemisphere 36.1
2018 Male, age 76, both hemispheres 35.1
2693 Female, age 94, both hemispheres 32.8
2692 Male, age 74, both hemispheres 32.6
2622 Female, age 67, right hemisphere 27.0
Perirhinal gyrus
nTPM: 41.8
1847 Female, age 91, left hemisphere 51.6
1794 Male, age 80, right hemisphere 43.8
1841 Female, age 85, right hemisphere 41.3
2521 Female, age 94, right hemisphere 39.8
2848 Male, age 76, right hemisphere 32.7
Subiculum
nTPM: 36.6
1901 Male, age 80, both hemispheres 41.1
2438 Female, age 94, left hemisphere 38.6
1977 Female, age 85, both hemispheres 38.4
2619 Male, age 74, both hemispheres 37.2
2042 Male, age 76, both hemispheres 32.9
2729 Female, age 91, right hemisphere 31.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.3
Samples: 197

Max nTPM: 91.7
Min nTPM: 18.8
Std nTPM: 12.7
Median nTPM: 40.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 91.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 79.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 76.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 73.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 72.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 68.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 68.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 67.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 64.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 64.1
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 63.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 2.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2.8
FF:10169-103B7 60 years, female 4.1
FF:10153-102I9 76 years, female 1.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 111.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 101.2
Samples: 4

Max nTPM: 106.2
Min nTPM: 93.3
Sample A Male 100.2
Sample B Male 106.2
Sample C Female 105.1
Sample D Female 93.3
Hippocampal formation
nTPM: 111.5
Samples: 4

Max nTPM: 124.9
Min nTPM: 101.9
Sample A Male 124.9
Sample B Male 101.9
Sample C Female 113.2
Sample D Female 106.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
69980995 Antisense, RP_050512_04_D10, Mouse strain C57BL/6J (56 days, male) 2.9

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