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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
293.5
nTPM
FANTOM5:
34.6
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
293.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 293.2
2090
Male, age 80, both hemispheres
300.5
2188
Female, age 91, both hemispheres
297.4
2301
Female, age 85, both hemispheres
288.3
1984
Male, age 76, both hemispheres
286.8
Dorsal cochlear nucleus nTPM: 281.3
2802
Male, age 74, right hemisphere
340.6
2187
Female, age 91, both hemispheres
286.6
2378
Male, age 80, both hemispheres
282.1
2370
Male, age 61, both hemispheres
259.4
2058
Male, age 76, both hemispheres
238.1
Dorsal tegmental nucleus nTPM: 293.5
2358
Male, age 61, both hemispheres
331.6
2326
Male, age 74, both hemispheres
319.3
2083
Male, age 80, both hemispheres
291.2
1936
Male, age 76, left hemisphere
231.8
Dorsolateral tegmental area nTPM: 289.4
2337
Male, age 61, both hemispheres
365.8
2654
Male, age 80, both hemispheres
306.3
2751
Female, age 85, both hemispheres
270.3
2360
Male, age 74, both hemispheres
269.3
2141
Male, age 76, both hemispheres
235.5
Kolliker-Fuse nucleus nTPM: 293.4
2315
Male, age 76, right hemisphere
338.7
2163
Male, age 80, both hemispheres
275.9
2793
Female, age 91, left hemisphere
265.6
Lateral lemniscal nuclei nTPM: 246.9
2169
Male, age 76, both hemispheres
283.6
2746
Female, age 85, left hemisphere
270.4
2036
Male, age 80, both hemispheres
228.2
2320
Female, age 91, left hemisphere
226.2
2453
Male, age 74, right hemisphere
226.0
Lateral parabrachial nucleus nTPM: 285.0
2792
Male, age 76, both hemispheres
304.6
2013
Male, age 80, both hemispheres
298.7
2139
Female, age 85, right hemisphere
294.7
2790
Male, age 61, both hemispheres
242.0
Lateral vestibular nucleus nTPM: 264.0
2311
Male, age 80, both hemispheres
309.5
2184
Male, age 76, both hemispheres
218.5
Locus coeruleus nTPM: 255.1
2720
Male, age 74, both hemispheres
294.7
2123
Female, age 91, both hemispheres
272.4
2317
Female, age 72, unknown
257.2
2162
Male, age 80, both hemispheres
252.7
2788
Male, age 74, unknown
252.7
2014
Male, age 55, unknown
240.7
1980
Male, age 76, both hemispheres
215.1
Medial parabrachial nucleus nTPM: 268.8
2170
Female, age 91, both hemispheres
324.3
2854
Male, age 80, both hemispheres
303.3
2463
Female, age 85, right hemisphere
247.7
2786
Male, age 76, both hemispheres
237.9
2156
Male, age 61, both hemispheres
231.0
Medial periolivary nuclei nTPM: 264.5
2063
Male, age 76, both hemispheres
300.1
2081
Male, age 80, both hemispheres
269.4
2171
Female, age 85, both hemispheres
255.9
2791
Male, age 74, right hemisphere
250.3
2458
Female, age 91, both hemispheres
246.9
Motor facial nucleus nTPM: 255.3
2062
Male, age 76, both hemispheres
295.1
2795
Female, age 91, both hemispheres
292.1
2697
Female, age 85, both hemispheres
256.4
2365
Male, age 74, right hemisphere
253.6
2126
Male, age 61, both hemispheres
237.0
2327
Male, age 80, both hemispheres
197.8
Motor trigeminal nucleus nTPM: 243.0
2560
Male, age 74, both hemispheres
259.4
2335
Male, age 61, both hemispheres
249.4
2309
Male, age 76, both hemispheres
245.0
2321
Female, age 91, both hemispheres
235.3
2079
Male, age 80, both hemispheres
226.2
Nuclei of the trapezoid body nTPM: 258.7
1983
Male, age 76, both hemispheres
362.6
2735
Female, age 85, both hemispheres
247.5
2166
Male, age 80, both hemispheres
241.3
2159
Male, age 61, both hemispheres
227.3
2368
Female, age 91, both hemispheres
214.7
Nucleus raphe magnus nTPM: 255.5
2051
Male, age 76, both hemispheres
281.0
2160
Male, age 61, both hemispheres
263.9
2172
Female, age 85, both hemispheres
260.7
2459
Female, age 91, both hemispheres
251.4
2455
Male, age 74, both hemispheres
249.0
2328
Male, age 80, both hemispheres
227.3
Paramedian reticular nucleus nTPM: 259.3
2050
Female, age 85, both hemispheres
273.7
2057
Male, age 80, both hemispheres
262.9
2052
Male, age 76, both hemispheres
259.5
2313
Male, age 61, both hemispheres
241.0
Pedunculopontine tegmental nucleus nTPM: 285.6
2338
Male, age 61, both hemispheres
335.6
2334
Male, age 80, both hemispheres
283.3
1921
Female, age 85, both hemispheres
238.0
Pontine nuclei nTPM: 283.2
2787
Female, age 85, both hemispheres
326.6
1863
Male, age 55, unknown
315.5
1968
Male, age 76, left hemisphere
307.4
2319
Female, age 91, both hemispheres
290.4
2727
Male, age 61, right hemisphere
265.3
2109
Female, age 72, unknown
262.7
2454
Male, age 74, left hemisphere
262.2
2115
Male, age 80, left hemisphere
235.3
Pontine raphe nucleus nTPM: 266.8
2122
Female, age 85, midline
289.6
2853
Male, age 76, midline
244.1
Posteroventral cochlear nucleus nTPM: 288.0
2341
Male, age 80, both hemispheres
341.3
2135
Female, age 91, both hemispheres
293.6
2371
Male, age 61, both hemispheres
293.2
2752
Female, age 85, both hemispheres
263.9
2070
Male, age 76, both hemispheres
248.2
Principal sensory trigeminal nucleus nTPM: 230.9
2158
Male, age 61, both hemispheres
249.3
2367
Female, age 91, left hemisphere
241.2
2324
Male, age 76, both hemispheres
217.1
2008
Male, age 80, left hemisphere
216.0
Reticular pontine nucleus, caudal nTPM: 246.5
2092
Male, age 76, both hemispheres
305.1
2559
Male, age 74, both hemispheres
253.7
2457
Female, age 91, both hemispheres
240.4
2332
Male, age 80, right hemisphere
186.9
Reticular pontine nucleus, oral nTPM: 253.9
2167
Male, age 76, both hemispheres
276.3
1939
Male, age 80, both hemispheres
266.2
2366
Female, age 91, both hemispheres
261.4
2012
Female, age 85, both hemispheres
242.6
2361
Male, age 74, both hemispheres
223.1
Reticulotegmental nucleus nTPM: 259.1
2452
Male, age 74, both hemispheres
294.6
2322
Female, age 91, both hemispheres
255.1
2325
Male, age 76, both hemispheres
245.5
2333
Male, age 80, both hemispheres
241.1
Spinal trigeminal nucleus, oral nTPM: 249.4
2164
Male, age 80, both hemispheres
250.8
1978
Male, age 76, both hemispheres
248.8
2737
Female, age 85, both hemispheres
248.5
Subcoeruleus area nTPM: 268.6
2451
Male, age 74, both hemispheres
322.1
1958
Male, age 80, both hemispheres
268.5
2369
Female, age 85, left hemisphere
268.0
2323
Female, age 91, left hemisphere
248.2
2089
Male, age 76, left hemisphere
236.1
Superior olive nTPM: 245.3
2020
Male, age 76, both hemispheres
278.9
1875
Female, age 85, both hemispheres
258.3
2561
Female, age 91, both hemispheres
243.9
2364
Male, age 74, right hemisphere
226.1
2329
Male, age 80, right hemisphere
219.1
Ventral periolivary nuclei nTPM: 259.9
2023
Male, age 76, both hemispheres
294.5
2130
Female, age 85, both hemispheres
265.7
2794
Female, age 91, left hemisphere
245.4
2165
Male, age 80, both hemispheres
234.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 267.7
2359
Male, age 61, both hemispheres
293.3
2161
Male, age 80, both hemispheres
283.0
2840
Female, age 85, both hemispheres
282.7
1959
Male, age 76, both hemispheres
265.9
2456
Female, age 91, both hemispheres
248.5
2449
Male, age 74, both hemispheres
233.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
