HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:14.3 nTPM
HPA Brain:28.5 nTPM
GTEx:14.3 nTPM
FANTOM5:58.2 Scaled Tags Per Million
Pig:34.1 nTPM
Mouse:20.0 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001233Antibody CAB017185
Glial cells Not detectedMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.5
Sample id Sample description nTPM
Hippocampus
nTPM: 27.6
1898 Male, age 80, left hemisphere 29.9
1911 Female, age 85, right hemisphere 29.0
1855 Male, age 76, left hemisphere 27.9
2529 Female, age 94, left hemisphere 27.6
2621 Female, age 67, right hemisphere 25.9
2148 Female, age 91, left hemisphere 25.4
Dentate gyrus
nTPM: 26.4
1927 Female, age 91, both hemispheres 28.3
2010 Male, age 76, both hemispheres 28.1
2246 Female, age 85, both hemispheres 27.4
2528 Male, age 74, both hemispheres 25.4
2530 Female, age 94, left hemisphere 24.7
2531 Female, age 67, both hemispheres 24.3
Entorhinal gyrus
nTPM: 26.0
1938 Female, age 85, left hemisphere 31.5
2117 Female, age 91, right hemisphere 30.0
1787 Male, age 76, left hemisphere 25.3
2686 Male, age 75, right hemisphere 24.0
2764 Male, age 80, right hemisphere 23.8
2613 Female, age 94, left hemisphere 21.4
Hippocampus, CA1
nTPM: 27.8
1873 Female, age 85, both hemispheres 30.7
2045 Male, age 76, both hemispheres 28.6
2527 Male, age 74, both hemispheres 27.3
2082 Female, age 91, right hemisphere 26.5
2749 Male, age 80, left hemisphere 25.9
Hippocampus, CA2
nTPM: 26.7
2249 Male, age 74, both hemispheres 28.6
1892 Male, age 76, both hemispheres 27.5
1963 Male, age 80, left hemisphere 26.7
2113 Female, age 91, right hemisphere 26.7
1940 Female, age 85, left hemisphere 26.4
2437 Female, age 94, left hemisphere 24.6
Hippocampus, CA3
nTPM: 26.0
1891 Female, age 85, both hemispheres 31.0
1867 Male, age 76, both hemispheres 27.8
2436 Male, age 74, both hemispheres 27.1
2137 Male, age 80, left hemisphere 25.4
2861 Female, age 67, both hemispheres 22.8
2620 Female, age 94, left hemisphere 21.7
Parahippocampal cortex
nTPM: 26.7
1850 Male, age 80, both hemispheres 31.5
1933 Female, age 85, both hemispheres 28.8
1990 Female, age 91, right hemisphere 27.7
2693 Female, age 94, both hemispheres 27.3
2532 Female, age 72, left hemisphere 26.6
2250 Female, age 67, right hemisphere 26.3
2692 Male, age 74, both hemispheres 26.1
2245 Female, age 91, both hemispheres 25.1
2018 Male, age 76, both hemispheres 24.3
2622 Female, age 67, right hemisphere 22.9
Perirhinal gyrus
nTPM: 28.5
1841 Female, age 85, right hemisphere 31.1
1847 Female, age 91, left hemisphere 29.2
1794 Male, age 80, right hemisphere 28.9
2848 Male, age 76, right hemisphere 27.6
2521 Female, age 94, right hemisphere 25.6
Subiculum
nTPM: 27.0
1977 Female, age 85, both hemispheres 29.2
2729 Female, age 91, right hemisphere 28.8
1901 Male, age 80, both hemispheres 26.5
2438 Female, age 94, left hemisphere 26.4
2042 Male, age 76, both hemispheres 26.2
2619 Male, age 74, both hemispheres 24.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.3
Samples: 197

Max nTPM: 23.0
Min nTPM: 8.6
Std nTPM: 2.4
Median nTPM: 14.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 23.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 22.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 22.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 21.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 20.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 20.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 19.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 19.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 19.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 19.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 19.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.2
FF:10153-102I9 76 years, female 84.3
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.1
Pig sample Sample description nTPM
Subiculum
nTPM: 34.1
Samples: 4

Max nTPM: 39.3
Min nTPM: 29.4
Sample A Female 39.3
Sample B Female 30.8
Sample C Male 29.4
Sample D Male 37.0
Dorsal hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 37.2
Min nTPM: 28.7
Sample A Female 34.0
Sample B Female 28.7
Sample C Male 37.2
Sample D Male 28.7
Entorhinal cortex
nTPM: 33.8
Samples: 4

Max nTPM: 36.6
Min nTPM: 31.4
Sample A Female 32.6
Sample B Female 36.6
Sample C Male 34.6
Sample D Male 31.4
Ventral hippocampus
nTPM: 29.4
Samples: 4

Max nTPM: 31.3
Min nTPM: 25.1
Sample A Female 31.3
Sample B Female 30.1
Sample C Male 25.1
Sample D Male 31.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 22.8
Min nTPM: 17.6
Sample A Male 20.2
Sample B Male 22.8
Sample C Female 19.2
Sample D Female 17.6
Hippocampal formation
nTPM: 19.6
Samples: 4

Max nTPM: 21.0
Min nTPM: 17.8
Sample A Male 20.5
Sample B Male 21.0
Sample C Female 17.8
Sample D Female 19.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
386256 Antisense, RP_040804_01_E07, Mouse strain C57BL/6J (56 days, male) 2.5

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