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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
51.1
nTPM
FANTOM5:
18.5
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
51.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 36.6
2188
Female, age 91, both hemispheres
42.8
2090
Male, age 80, both hemispheres
37.1
1984
Male, age 76, both hemispheres
33.3
2301
Female, age 85, both hemispheres
33.0
Dorsal cochlear nucleus nTPM: 40.8
2802
Male, age 74, right hemisphere
47.1
2378
Male, age 80, both hemispheres
41.9
2187
Female, age 91, both hemispheres
40.2
2370
Male, age 61, both hemispheres
39.1
2058
Male, age 76, both hemispheres
35.5
Dorsal tegmental nucleus nTPM: 30.2
2326
Male, age 74, both hemispheres
34.9
2083
Male, age 80, both hemispheres
32.3
2358
Male, age 61, both hemispheres
27.0
1936
Male, age 76, left hemisphere
26.5
Dorsolateral tegmental area nTPM: 31.3
2360
Male, age 74, both hemispheres
36.3
2751
Female, age 85, both hemispheres
35.3
2654
Male, age 80, both hemispheres
35.0
2141
Male, age 76, both hemispheres
25.0
2337
Male, age 61, both hemispheres
24.9
Kolliker-Fuse nucleus nTPM: 33.6
2163
Male, age 80, both hemispheres
41.0
2793
Female, age 91, left hemisphere
34.9
2315
Male, age 76, right hemisphere
25.0
Lateral lemniscal nuclei nTPM: 47.5
2036
Male, age 80, both hemispheres
62.6
2453
Male, age 74, right hemisphere
51.3
2746
Female, age 85, left hemisphere
42.7
2320
Female, age 91, left hemisphere
42.1
2169
Male, age 76, both hemispheres
38.8
Lateral parabrachial nucleus nTPM: 36.8
2139
Female, age 85, right hemisphere
41.2
2790
Male, age 61, both hemispheres
37.4
2013
Male, age 80, both hemispheres
35.9
2792
Male, age 76, both hemispheres
32.5
Lateral vestibular nucleus nTPM: 32.8
2311
Male, age 80, both hemispheres
33.1
2184
Male, age 76, both hemispheres
32.4
Locus coeruleus nTPM: 34.6
2014
Male, age 55, unknown
40.5
2123
Female, age 91, both hemispheres
37.8
2162
Male, age 80, both hemispheres
36.9
2317
Female, age 72, unknown
35.2
2720
Male, age 74, both hemispheres
34.7
1980
Male, age 76, both hemispheres
30.9
2788
Male, age 74, unknown
26.3
Medial parabrachial nucleus nTPM: 33.3
2156
Male, age 61, both hemispheres
36.1
2854
Male, age 80, both hemispheres
35.0
2170
Female, age 91, both hemispheres
32.7
2463
Female, age 85, right hemisphere
32.2
2786
Male, age 76, both hemispheres
30.6
Medial periolivary nuclei nTPM: 46.0
2171
Female, age 85, both hemispheres
57.5
2458
Female, age 91, both hemispheres
47.2
2063
Male, age 76, both hemispheres
46.4
2081
Male, age 80, both hemispheres
39.6
2791
Male, age 74, right hemisphere
39.4
Motor facial nucleus nTPM: 42.1
2327
Male, age 80, both hemispheres
46.0
2062
Male, age 76, both hemispheres
45.7
2365
Male, age 74, right hemisphere
44.0
2795
Female, age 91, both hemispheres
40.8
2697
Female, age 85, both hemispheres
39.4
2126
Male, age 61, both hemispheres
36.8
Motor trigeminal nucleus nTPM: 39.6
2079
Male, age 80, both hemispheres
49.0
2560
Male, age 74, both hemispheres
44.3
2321
Female, age 91, both hemispheres
41.8
2335
Male, age 61, both hemispheres
37.1
2309
Male, age 76, both hemispheres
25.7
Nuclei of the trapezoid body nTPM: 51.1
2735
Female, age 85, both hemispheres
61.6
2159
Male, age 61, both hemispheres
54.8
2368
Female, age 91, both hemispheres
50.3
2166
Male, age 80, both hemispheres
45.1
1983
Male, age 76, both hemispheres
43.9
Nucleus raphe magnus nTPM: 50.3
2160
Male, age 61, both hemispheres
59.7
2172
Female, age 85, both hemispheres
57.0
2459
Female, age 91, both hemispheres
51.9
2455
Male, age 74, both hemispheres
49.0
2328
Male, age 80, both hemispheres
44.6
2051
Male, age 76, both hemispheres
39.4
Paramedian reticular nucleus nTPM: 40.3
2050
Female, age 85, both hemispheres
49.6
2313
Male, age 61, both hemispheres
41.3
2057
Male, age 80, both hemispheres
37.0
2052
Male, age 76, both hemispheres
33.3
Pedunculopontine tegmental nucleus nTPM: 30.4
2334
Male, age 80, both hemispheres
32.5
2338
Male, age 61, both hemispheres
29.9
1921
Female, age 85, both hemispheres
28.7
Pontine nuclei nTPM: 50.8
2727
Male, age 61, right hemisphere
63.6
1863
Male, age 55, unknown
62.6
2787
Female, age 85, both hemispheres
54.1
2109
Female, age 72, unknown
51.3
1968
Male, age 76, left hemisphere
46.3
2319
Female, age 91, both hemispheres
45.3
2454
Male, age 74, left hemisphere
43.7
2115
Male, age 80, left hemisphere
39.6
Pontine raphe nucleus nTPM: 36.7
2122
Female, age 85, midline
45.2
2853
Male, age 76, midline
28.2
Posteroventral cochlear nucleus nTPM: 38.0
2135
Female, age 91, both hemispheres
48.1
2752
Female, age 85, both hemispheres
41.5
2371
Male, age 61, both hemispheres
35.0
2070
Male, age 76, both hemispheres
34.4
2341
Male, age 80, both hemispheres
31.1
Principal sensory trigeminal nucleus nTPM: 45.6
2158
Male, age 61, both hemispheres
56.7
2008
Male, age 80, left hemisphere
52.0
2367
Female, age 91, left hemisphere
46.3
2324
Male, age 76, both hemispheres
27.4
Reticular pontine nucleus, caudal nTPM: 39.9
2332
Male, age 80, right hemisphere
45.5
2457
Female, age 91, both hemispheres
44.3
2559
Male, age 74, both hemispheres
37.8
2092
Male, age 76, both hemispheres
32.1
Reticular pontine nucleus, oral nTPM: 36.8
2012
Female, age 85, both hemispheres
45.7
2366
Female, age 91, both hemispheres
41.1
2361
Male, age 74, both hemispheres
39.8
1939
Male, age 80, both hemispheres
30.6
2167
Male, age 76, both hemispheres
26.9
Reticulotegmental nucleus nTPM: 40.0
2322
Female, age 91, both hemispheres
43.5
2333
Male, age 80, both hemispheres
43.0
2325
Male, age 76, both hemispheres
36.9
2452
Male, age 74, both hemispheres
36.7
Spinal trigeminal nucleus, oral nTPM: 34.4
2164
Male, age 80, both hemispheres
36.0
2737
Female, age 85, both hemispheres
35.4
1978
Male, age 76, both hemispheres
31.9
Subcoeruleus area nTPM: 36.8
1958
Male, age 80, both hemispheres
39.5
2323
Female, age 91, left hemisphere
37.8
2451
Male, age 74, both hemispheres
37.3
2089
Male, age 76, left hemisphere
35.0
2369
Female, age 85, left hemisphere
34.2
Superior olive nTPM: 42.1
1875
Female, age 85, both hemispheres
53.8
2329
Male, age 80, right hemisphere
42.3
2561
Female, age 91, both hemispheres
41.9
2364
Male, age 74, right hemisphere
37.7
2020
Male, age 76, both hemispheres
34.7
Ventral periolivary nuclei nTPM: 43.3
2794
Female, age 91, left hemisphere
48.9
2165
Male, age 80, both hemispheres
43.6
2130
Female, age 85, both hemispheres
43.4
2023
Male, age 76, both hemispheres
37.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 39.2
2161
Male, age 80, both hemispheres
48.1
2456
Female, age 91, both hemispheres
47.0
2449
Male, age 74, both hemispheres
40.8
1959
Male, age 76, both hemispheres
38.4
2840
Female, age 85, both hemispheres
34.5
2359
Male, age 61, both hemispheres
26.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
