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ARHGAP11A-SCG5
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                                  • ARHGAP11A-SCG5
                                  BRAIN CEREBELLUM Show tissue menu
                                  AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
                                  MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
                                  ANTIBODIES
                                  AND
                                  VALIDATION
                                  Brain proteome
                                  Cerebellum
                                  CEREBELLUM - Expression summary
                                  Protein expression
                                  Cerebellumi

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  h
                                  m
                                  l
                                  n
                                  Cells in granular layer: Not detected
                                  Cells in molecular layer: Not detected
                                  Purkinje cells: Not detected
                                  Protein expressioni

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  No data
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  HPA Brain:1.7 nTPM
                                  FANTOM5:0.2 Scaled Tags Per Million

                                  CEREBELLUM - Annotated protein expression
                                  Pending normal tissue analysis

                                  CEREBELLUM - Antibody stainingi

                                  Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

                                  Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

                                  Antibody HPA013136Antibody HPA074618
                                  Purkinje cells Not detectedNot detected
                                  Cells in granular layer Not detectedNot detected
                                  Cells in molecular layer Not detectedNot detected





                                  CEREBELLUM - HPA Brain RNA-seq
                                  Max nTPM 1.7
                                  Sample id Sample description nTPM
                                  Cerebellar cortex
                                  nTPM: 1.5
                                  1788 Male, age 55, unknown 1.8
                                  1768 Female, age 72, unknown 1.7
                                  1774 Male, age 80, left hemisphere 1.5
                                  2003 Female, age 85, right hemisphere 1.5
                                  2055 Female, age 91, right hemisphere 1.5
                                  1769 Male, age 76, right hemisphere 1.4
                                  2006 Male, age 61, right hemisphere 1.4
                                  2101 Male, age 74, right hemisphere 1.1
                                  Cerebellar nuclei
                                  nTPM: 1.7
                                  1871 Male, age 74, unknown 2.1
                                  2882 Male, age 76, left hemisphere 2.0
                                  2177 Female, age 85, both hemispheres 1.9
                                  2005 Male, age 80, left hemisphere 1.7
                                  2318 Male, age 74, left hemisphere 1.7
                                  1879 Male, age 55, unknown 1.6
                                  2783 Female, age 72, unknown 1.5
                                  1966 Female, age 91, left hemisphere 1.4
                                  2175 Male, age 61, right hemisphere 1.4
                                  Flocculonodular lobe
                                  nTPM: 1.5
                                  1765 Male, age 55, unknown 1.8
                                  1767 Male, age 76, left hemisphere 1.8
                                  1835 Female, age 85, right hemisphere 1.8
                                  1771 Male, age 80, left hemisphere 1.6
                                  2176 Female, age 91, right hemisphere 1.5
                                  1792 Male, age 74, unknown 1.3
                                  2004 Male, age 61, right hemisphere 0.9
                                  Vermis
                                  nTPM: 1.5
                                  1988 Female, age 85, left hemisphere 1.9
                                  1825 Male, age 74, unknown 1.7
                                  2834 Male, age 80, left hemisphere 1.7
                                  1770 Male, age 76, left hemisphere 1.6
                                  1778 Female, age 91, left hemisphere 1.5
                                  1766 Male, age 55, unknown 1.4
                                  2460 Male, age 61, both hemispheres 1.4
                                  1751 Male, age 74, right hemisphere 1.3
                                  1928 Female, age 72, unknown 1.1

                                  CEREBELLUM - FANTOM5 CAGEi

                                  RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                  Max Scaled Tags Per Million 0.2
                                  FANTOM5 sample id Sample description Scaled Tags Per Million
                                  Cerebellum
                                  Scaled Tags Per Million: 0.2
                                  FF:10166-103B4 76 years, female 0.4
                                  FF:10083-102B2 22-68 years, mixed 0.0

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