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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Squamous epithelial cells:
High
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
25.4
nTPM
GTEx:
25.4
nTPM
FANTOM5:
30.4
Scaled Tags Per Million
VAGINA - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA003916
Antibody CAB037318
Squamous epithelial cells
Medium
High
VAGINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
25.4
GTEx sample id
Sample description
nTPM
Vagina Average nTPM: 25.4
Samples: 156
Max nTPM: 52.4
Min nTPM: 8.1
Std nTPM: 8.2
Median nTPM: 24.4
GTEX-1LVAM-1926-SM-E6CIM
50-59 years, female
52.4
GTEX-1F5PL-1826-SM-7P8PP
40-49 years, female
48.2
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
44.3
GTEX-14H4A-2426-SM-664OQ
40-49 years, female
43.7
GTEX-1I4MK-1726-SM-ARL7O
50-59 years, female
42.2
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
41.4
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
40.6
GTEX-14PKU-1326-SM-6871B
40-49 years, female
40.4
GTEX-1JN76-1526-SM-CNPPF
20-29 years, female
39.4
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
38.9
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
38.4
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
38.3
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
37.6
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
37.4
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
36.9
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
36.5
GTEX-14PN3-1626-SM-6AJAV
60-69 years, female
36.1
GTEX-1QP28-1426-SM-EVR4E
50-59 years, female
35.7
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
35.6
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
35.0
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
34.8
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
34.8
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
34.0
GTEX-14PJ6-1626-SM-6872D
60-69 years, female
34.0
GTEX-1QPFJ-1626-SM-DTX7X
30-39 years, female
34.0
GTEX-1GN1W-1526-SM-7P8TG
50-59 years, female
33.4
GTEX-1QCLZ-2226-SM-DTX7R
60-69 years, female
33.4
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
33.3
GTEX-16NGA-1626-SM-72D6M
40-49 years, female
33.0
GTEX-1LGOU-1126-SM-D3LAI
20-29 years, female
33.0
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
32.6
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
32.5
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
32.4
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
32.2
GTEX-11I78-2026-SM-5987C
50-59 years, female
32.1
GTEX-XUZC-1226-SM-4BRVJ
30-39 years, female
31.9
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
31.2
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
30.9
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
30.9
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
30.5
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
30.4
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
30.2
GTEX-1IDJU-1026-SM-AHZ2U
60-69 years, female
29.8
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
29.6
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
29.5
GTEX-14JG6-0726-SM-69LQH
30-39 years, female
29.2
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
29.0
GTEX-1C475-0526-SM-793AC
40-49 years, female
28.9
GTEX-1R9JW-1426-SM-DTX9K
30-39 years, female
28.9
GTEX-QCQG-1226-SM-48U23
50-59 years, female
28.6
GTEX-S341-1226-SM-4AD5S
40-49 years, female
28.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
28.5
GTEX-18D9A-1026-SM-7KFRU
30-39 years, female
28.3
GTEX-1F48J-2526-SM-7P8TU
50-59 years, female
27.7
GTEX-1MCYP-1326-SM-EV7AD
20-29 years, female
27.7
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
27.6
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
27.6
GTEX-15SDE-1726-SM-6LPJS
50-59 years, female
27.5
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
27.1
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
26.8
GTEX-WYVS-1426-SM-4ONCV
40-49 years, female
26.8
GTEX-17F9Y-2326-SM-7DUFP
70-79 years, female
26.6
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
26.6
GTEX-1MCC2-1126-SM-EVYD6
30-39 years, female
26.6
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
26.4
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
26.4
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
26.3
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
26.2
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
25.6
GTEX-1NUQO-1826-SM-E6CQU
20-29 years, female
25.6
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
25.5
GTEX-1LH75-1726-SM-DHXKZ
50-59 years, female
25.4
GTEX-QVJO-2526-SM-CYPRA
60-69 years, female
25.3
GTEX-1IE54-2626-SM-CMKFY
40-49 years, female
25.2
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
25.1
GTEX-1ICG6-1626-SM-ARL81
70-79 years, female
24.9
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
24.6
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
24.4
GTEX-1HCUA-1026-SM-A9SMI
50-59 years, female
24.4
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
24.1
GTEX-1GMR8-2526-SM-7RHI9
50-59 years, female
24.0
GTEX-1LGRB-2126-SM-COH48
50-59 years, female
23.9
GTEX-15SB6-1426-SM-7KUEM
50-59 years, female
23.7
GTEX-1GF9U-1926-SM-7P8TZ
40-49 years, female
23.7
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
23.6
GTEX-15ER7-2526-SM-7KUFW
20-29 years, female
23.5
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
23.4
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
23.3
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
23.2
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
22.6
GTEX-ZAK1-2426-SM-EXOHM
50-59 years, female
22.6
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
22.5
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
22.4
GTEX-14PJM-2926-SM-69LOE
50-59 years, female
22.4
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
22.3
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
22.2
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
22.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
22.0
GTEX-15SHU-2926-SM-7KUKT
40-49 years, female
22.0
GTEX-1HCU6-2326-SM-ACKXP
60-69 years, female
22.0
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
21.9
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
21.8
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
21.8
GTEX-1HFI7-1126-SM-A96S5
50-59 years, female
21.7
GTEX-1JMQL-2326-SM-CNNPV
50-59 years, female
21.7
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
21.6
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
21.5
GTEX-1CAMS-2326-SM-793CR
40-49 years, female
21.3
GTEX-1LNCM-1026-SM-E9U5D
50-59 years, female
20.7
GTEX-1I1GT-1226-SM-B2LVK
60-69 years, female
20.4
GTEX-18A7A-2826-SM-7LT8J
50-59 years, female
20.3
GTEX-1EWIQ-2326-SM-7IGNF
70-79 years, female
20.3
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
20.3
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
20.0
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
20.0
GTEX-1A8FM-2426-SM-7IGPE
50-59 years, female
19.8
GTEX-SN8G-2626-SM-EXUQT
50-59 years, female
19.8
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
19.5
GTEX-1PIEJ-1926-SM-EVYB7
20-29 years, female
19.3
GTEX-15DYW-2926-SM-6PANA
60-69 years, female
19.0
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
18.6
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
18.3
GTEX-17JCI-2526-SM-7DHLB
60-69 years, female
18.3
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
18.3
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
18.3
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
18.0
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
17.7
GTEX-Q734-1426-SM-DTXFX
40-49 years, female
17.6
GTEX-1AMFI-1526-SM-73KVY
50-59 years, female
17.5
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
17.5
GTEX-1S5ZU-2626-SM-E9TII
20-29 years, female
17.4
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
17.3
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
17.3
GTEX-1J1OQ-1826-SM-CL53R
40-49 years, female
17.3
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
17.2
GTEX-1HCU8-2026-SM-9YFLE
60-69 years, female
17.1
GTEX-16NPV-2526-SM-6M483
50-59 years, female
16.9
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
16.1
GTEX-15UF6-2126-SM-6M46Z
70-79 years, female
16.1
GTEX-145LS-2526-SM-5TDC9
60-69 years, female
15.4
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
15.4
GTEX-1JN1M-2326-SM-ARZNG
60-69 years, female
15.4
GTEX-1LVAN-1626-SM-CNPQ7
50-59 years, female
15.4
GTEX-OHPN-2426-SM-E9TI5
60-69 years, female
15.4
GTEX-1J8EW-2526-SM-CKZO2
60-69 years, female
15.3
GTEX-183WM-2126-SM-7LG4I
70-79 years, female
15.2
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
14.4
GTEX-1GN1U-2426-SM-9KNTU
50-59 years, female
13.9
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
13.8
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
12.4
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
10.3
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
10.2
GTEX-1HBPH-2926-SM-9WPNX
40-49 years, female
9.9
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
8.7
GTEX-1HBPM-2726-SM-9WYUA
60-69 years, female
8.3
GTEX-NPJ7-2526-SM-EV79A
60-69 years, female
8.1
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VAGINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.