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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in red pulp:
Medium
Cells in white pulp:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
27.4
nTPM
HPA:
7.2
nTPM
GTEx:
27.4
nTPM
FANTOM5:
26.7
Scaled Tags Per Million
SPLEEN - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA001077
Cells in red pulp
Medium
Cells in white pulp
Medium
SPLEEN - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPM
7.2
Female, age 60
Spleen sample 236 nTPM: 6
Cell types%
Lymphocytes:
40
Macrophages:
30
Endothelial cells:
15
Fibroblasts:
5
Other cell types:
10
Male, age 17
Spleen sample 237 nTPM: 11.9
Cell types%
Lymphocytes:
40
Macrophages:
35
Endothelial cells:
15
Fibroblasts:
5
Other cell types:
5
Male, age 20
Spleen sample 238 nTPM: 9.1
Cell types%
Lymphocytes:
40
Macrophages:
30
Endothelial cells:
15
Fibroblasts:
5
Other cell types:
10
Female, age 19
Spleen sample 239 nTPM: 7.2
Cell types%
Lymphocytes:
40
Macrophages:
30
Endothelial cells:
15
Fibroblasts:
10
Other cell types:
5
Female, age 65
Spleen sample 378 nTPM: 1.9
Cell types%
Lymphocytes:
35
Macrophages:
30
Endothelial cells:
20
Fibroblasts:
10
Other cell types:
5
SPLEEN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
27.4
GTEx sample id
Sample description
nTPM
Spleen Average nTPM: 27.4
Samples: 241
Max nTPM: 46.7
Min nTPM: 13.4
Std nTPM: 6.1
Median nTPM: 27.5
GTEX-NFK9-1426-SM-43ISG
40-49 years, male
46.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
45.9
GTEX-WXYG-0126-SM-4OND7
50-59 years, female
45.4
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
45.2
GTEX-17F97-1626-SM-72D6W
50-59 years, male
42.7
GTEX-1H3O1-1126-SM-9WPO9
60-69 years, male
40.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
40.1
GTEX-1QW4Y-0126-SM-DPRZQ
30-39 years, male
39.8
GTEX-1R9PM-0126-SM-DPRY6
20-29 years, male
39.8
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
39.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
39.1
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
38.7
GTEX-1N2EF-1526-SM-EXOIY
60-69 years, male
38.6
GTEX-P4QT-0926-SM-EZ6KQ
50-59 years, female
37.8
GTEX-ZDYS-1026-SM-4WKHC
50-59 years, male
37.3
GTEX-P4PQ-0926-SM-E9U4D
60-69 years, male
36.9
GTEX-14PJ6-0226-SM-6AJ9K
60-69 years, female
36.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
36.4
GTEX-1C64O-1626-SM-731EN
60-69 years, male
36.3
GTEX-16MT8-1826-SM-7EWE8
60-69 years, female
35.8
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
35.8
GTEX-1MJK3-0126-SM-DPRYY
20-29 years, male
35.7
GTEX-1QP2A-2526-SM-EXOJB
50-59 years, male
35.7
GTEX-1QCLZ-1026-SM-E6CR1
60-69 years, female
34.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
34.5
GTEX-1OFPY-0126-SM-EXOJ3
60-69 years, male
34.5
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
34.4
GTEX-18A66-1826-SM-7KFSU
60-69 years, male
34.3
GTEX-QV44-0126-SM-CJI1X
50-59 years, male
34.3
GTEX-1F5PL-2226-SM-7MKHE
40-49 years, female
34.2
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
34.0
GTEX-WY7C-0126-SM-4ONCO
50-59 years, male
33.8
GTEX-1MUQO-1326-SM-EV7AE
60-69 years, male
33.8
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
33.6
GTEX-1KD5A-1526-SM-D4P3W
50-59 years, male
33.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
33.4
GTEX-16XZY-0126-SM-7IGQ9
70-79 years, male
33.4
GTEX-QDT8-1526-SM-EXOHP
30-39 years, female
33.1
GTEX-1J8Q3-0126-SM-C1YSI
60-69 years, male
33.0
GTEX-1R9K5-1126-SM-EAZ4G
50-59 years, male
32.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
32.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
32.4
GTEX-X585-1826-SM-4QAS3
50-59 years, male
32.4
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
32.4
GTEX-1GF9U-0126-SM-AHZ4G
40-49 years, female
32.3
GTEX-1LSVX-1426-SM-DHXJO
60-69 years, male
32.3
GTEX-1K9T9-0626-SM-CXZKY
50-59 years, female
32.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
32.1
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
32.1
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
32.1
GTEX-WYJK-0726-SM-4ONC9
50-59 years, male
31.9
GTEX-14PK6-0526-SM-69LOF
70-79 years, female
31.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
31.8
GTEX-1JKYR-1126-SM-CGQGJ
20-29 years, male
31.8
GTEX-QMRM-0226-SM-CL55S
50-59 years, male
31.7
GTEX-1KANA-1226-SM-DHXKE
20-29 years, male
31.6
GTEX-1IDJE-0126-SM-C1YQ6
50-59 years, female
31.5
GTEX-1AYD5-0226-SM-79ONV
50-59 years, male
31.4
GTEX-1LG7Z-0126-SM-EV79V
30-39 years, male
31.2
GTEX-15CHQ-1226-SM-6ETZL
60-69 years, male
31.1
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
31.1
GTEX-1CB4F-0226-SM-7EPHS
60-69 years, male
31.0
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
30.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
30.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
30.7
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
30.7
GTEX-ZPIC-0126-SM-DNZZ9
40-49 years, female
30.7
GTEX-1J8QM-0926-SM-C1YQ9
60-69 years, female
30.5
GTEX-1PIIG-1226-SM-EXOIQ
30-39 years, male
30.5
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
30.4
GTEX-17F98-0126-SM-7MGW3
40-49 years, female
30.4
GTEX-1QCLY-0126-SM-DPRZV
30-39 years, male
30.4
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
30.3
GTEX-111FC-1326-SM-5N9D9
60-69 years, male
30.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
30.1
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
30.1
GTEX-1F5PK-0726-SM-7MGXN
50-59 years, male
30.1
GTEX-1B97I-0126-SM-731DH
40-49 years, male
30.0
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
29.9
GTEX-Y5V5-1126-SM-EVYAR
60-69 years, female
29.9
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
29.8
GTEX-1IDJC-0126-SM-C1YQC
50-59 years, male
29.7
GTEX-1PDJ9-0226-SM-DPRYX
20-29 years, male
29.7
GTEX-ZTTD-1726-SM-57WEL
50-59 years, male
29.6
GTEX-1JMPZ-0926-SM-CXZJR
30-39 years, male
29.6
GTEX-18A67-1526-SM-7LG6F
50-59 years, male
29.5
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
29.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
29.5
GTEX-1HCU7-1426-SM-CNNQK
50-59 years, male
29.5
GTEX-1R7EV-0126-SM-EAZ3O
40-49 years, male
29.5
GTEX-1QMI2-1526-SM-EXOJT
60-69 years, male
29.4
GTEX-17F9E-1126-SM-79OMO
50-59 years, male
29.3
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
29.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
29.2
GTEX-1JK1U-0126-SM-C1YQY
60-69 years, male
29.2
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
29.0
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
29.0
GTEX-1JMQK-1126-SM-CXZJW
60-69 years, male
29.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
28.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
28.8
GTEX-15RJ7-0126-SM-6LPJN
40-49 years, male
28.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
28.8
GTEX-1MGNQ-1126-SM-EAZ4Y
40-49 years, male
28.7
GTEX-ZEX8-0726-SM-4WKH8
50-59 years, male
28.6
GTEX-15DYW-1426-SM-6LPIW
60-69 years, female
28.4
GTEX-1HCU9-0126-SM-9WG7M
20-29 years, male
28.4
GTEX-P78B-1226-SM-EZ6KP
40-49 years, female
28.4
GTEX-1LNCM-0426-SM-DHXK6
50-59 years, female
28.3
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
28.2
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
28.2
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
28.2
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
28.1
GTEX-15ETS-3126-SM-6LPKN
40-49 years, female
28.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
28.0
GTEX-1C4CL-0626-SM-731DM
30-39 years, male
28.0
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
28.0
GTEX-1K2DA-0126-SM-CGQGV
50-59 years, male
27.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
27.7
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
27.6
GTEX-17GQL-0126-SM-72D5Q
60-69 years, male
27.5
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
27.5
GTEX-1QP66-0126-SM-EAZ3N
50-59 years, male
27.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
27.4
GTEX-13OVK-0426-SM-7KFT8
40-49 years, male
27.2
GTEX-169BO-0126-SM-79OLS
50-59 years, male
27.2
GTEX-12WSD-1726-SM-5GCN4
60-69 years, female
27.1
GTEX-14PKU-0526-SM-6871A
40-49 years, female
27.1
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
27.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
26.9
GTEX-1MCYP-0226-SM-EV7A3
20-29 years, female
26.9
GTEX-14PJ5-0326-SM-664OD
60-69 years, female
26.8
GTEX-ZF2S-0326-SM-4WKGD
50-59 years, female
26.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
26.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
26.7
GTEX-15CHC-0726-SM-6AJ9D
60-69 years, female
26.6
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
26.5
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
26.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
26.4
GTEX-15SDE-0126-SM-793BA
50-59 years, female
26.4
GTEX-1FIGZ-0126-SM-7MKGZ
40-49 years, male
26.4
GTEX-R55C-0126-SM-48FEQ
40-49 years, male
26.2
GTEX-15ER7-1526-SM-6LLHO
20-29 years, female
26.1
GTEX-1RAZR-1626-SM-EAZ4V
40-49 years, male
26.1
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
26.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
26.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
25.8
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
25.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
25.8
GTEX-17HHE-0326-SM-793BH
50-59 years, male
25.7
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
25.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
25.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
25.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
25.5
GTEX-1L5NE-0926-SM-D4P3P
50-59 years, male
25.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
25.4
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
25.4
GTEX-15DZA-0126-SM-6PAMV
30-39 years, female
25.3
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
25.3
GTEX-1MCC2-0826-SM-EV7AM
30-39 years, female
25.2
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
25.1
GTEX-1HSMQ-0126-SM-D4P2I
50-59 years, male
25.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
25.0
GTEX-1KAFJ-1026-SM-D4P2Z
50-59 years, male
24.6
GTEX-WYVS-0126-SM-4ONDH
40-49 years, female
24.5
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
24.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
24.3
GTEX-1F75I-0226-SM-7MKHQ
40-49 years, male
24.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
24.1
GTEX-ZG7Y-2026-SM-DO91N
50-59 years, male
24.0
GTEX-16MT9-1726-SM-6M47P
60-69 years, female
23.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
23.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
23.8
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
23.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
23.7
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
23.6
GTEX-1R9K4-1526-SM-DPRY5
60-69 years, male
23.6
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
23.5
GTEX-14PJ4-0526-SM-6871G
60-69 years, male
23.5
GTEX-144GN-2126-SM-5O99D
50-59 years, male
23.3
GTEX-1QP29-0126-SM-EAZ3S
50-59 years, male
23.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
22.8
GTEX-15F5U-0126-SM-6LPKA
40-49 years, male
22.8
GTEX-QESD-0126-SM-EXOHG
20-29 years, male
22.8
GTEX-14BMU-0426-SM-73KYT
20-29 years, female
22.6
GTEX-14JG6-0226-SM-6872A
30-39 years, female
22.6
GTEX-1A3MV-0126-SM-731FQ
30-39 years, male
22.6
GTEX-1R9JW-0126-SM-EAZ4P
30-39 years, female
22.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
22.3
GTEX-1PWST-1626-SM-EXOIU
70-79 years, male
22.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
22.2
GTEX-1QAET-2326-SM-EXOJ1
50-59 years, male
22.2
GTEX-1S831-0726-SM-EV79O
20-29 years, male
22.2
GTEX-15RIG-0126-SM-6PAN4
40-49 years, male
22.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
21.9
GTEX-1CB4I-1426-SM-79OLZ
50-59 years, male
21.6
GTEX-1B97J-1926-SM-7IGQB
50-59 years, female
21.4
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
21.2
GTEX-1R7EU-2026-SM-E9U63
60-69 years, male
21.2
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
21.1
GTEX-1AX9K-0226-SM-793CM
50-59 years, male
21.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
21.0
GTEX-ZF29-0626-SM-4WKHD
60-69 years, female
21.0
GTEX-1JMLX-1426-SM-CNNPO
50-59 years, male
21.0
GTEX-1C6VQ-2126-SM-7IGNL
50-59 years, male
20.9
GTEX-14ICL-0126-SM-664NG
30-39 years, male
20.6
GTEX-111CU-0426-SM-5GZY1
50-59 years, male
20.2
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
20.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
20.1
GTEX-1PPH7-0126-SM-E6CPB
40-49 years, male
20.1
GTEX-1CB4E-0126-SM-7DHMX
60-69 years, male
19.9
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
19.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
19.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
19.8
GTEX-1RNTQ-1026-SM-EV7B4
20-29 years, female
19.6
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
19.5
GTEX-1LVAN-1026-SM-CNNQZ
50-59 years, female
19.4
GTEX-1AMFI-0926-SM-731E4
50-59 years, female
19.1
GTEX-15UF7-1926-SM-6LPJT
40-49 years, male
19.0
GTEX-1LSNM-0126-SM-EAZ57
50-59 years, male
19.0
GTEX-OIZF-0926-SM-7MKH7
60-69 years, male
19.0
GTEX-17F96-1426-SM-7IGQA
70-79 years, male
18.8
GTEX-1LGRB-0126-SM-CNNR6
50-59 years, female
18.7
GTEX-14E1K-0126-SM-664NL
50-59 years, male
18.5
GTEX-15RIF-0526-SM-6LLI2
20-29 years, male
18.3
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
18.3
GTEX-1RAZA-1026-SM-E6CQ9
20-29 years, male
18.3
GTEX-15SB6-0126-SM-6LPJR
50-59 years, female
17.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
17.8
GTEX-ZPCL-0626-SM-DNZZ6
60-69 years, female
17.7
GTEX-1B8KZ-0226-SM-7EWF6
50-59 years, male
17.5
GTEX-1RMOY-0726-SM-EV79D
50-59 years, male
17.4
GTEX-1C475-1126-SM-7MGY7
40-49 years, female
17.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
17.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
17.0
GTEX-15SHV-0126-SM-6LPIS
60-69 years, male
17.0
GTEX-1RAZQ-0126-SM-EV7B1
30-39 years, male
16.8
GTEX-1H3VY-1526-SM-9WG7S
50-59 years, male
16.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
15.9
GTEX-14PN3-0226-SM-6871K
60-69 years, female
15.2
GTEX-1GZ4H-0126-SM-9JGGI
50-59 years, female
13.9
GTEX-1JKYN-0326-SM-AHZ4D
30-39 years, male
13.4
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SPLEEN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
