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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in glomeruli:
Low
Cells in tubules:
High
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
26.7
nTPM
HPA:
20.9
nTPM
GTEx:
26.7
nTPM
FANTOM5:
51.1
Scaled Tags Per Million
KIDNEY - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA052265
Cells in glomeruli
Low
Cells in tubules
High
KIDNEY - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPM
20.9
Female, age 58
Kidney sample 55 nTPM: 19.3
Cell types%
Cells in tubules:
60
Cells in glomeruli:
20
Fibroblasts:
5
Other cell types:
15
Female, age 67
Kidney sample 56 nTPM: 17.8
Cell types%
Cells in tubules:
70
Cells in glomeruli:
15
Fibroblasts:
10
Other cell types:
5
Female, age 55
Kidney sample 57 nTPM: 17.2
Cell types%
Cells in tubules:
80
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
5
Male, age 46
Kidney sample 58 nTPM: 16.9
Cell types%
Cells in tubules:
60
Cells in glomeruli:
25
Fibroblasts:
5
Other cell types:
10
Female, age 57
Kidney sample 358 nTPM: 24.6
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Male, age 78
Kidney sample 377 nTPM: 21.1
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
20
Male, age 73
Kidney sample 380 nTPM: 23.3
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Female, age 59
Kidney sample 394 nTPM: 18.5
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
15
Female, age 48
Kidney sample 414 nTPM: 29.3
Cell types%
Cells in tubules:
60
Cells in glomeruli:
5
Fibroblasts:
10
Other cell types:
25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
26.7
GTEx sample id
Sample description
nTPM
Kidney - Cortex Average nTPM: 21.3
Samples: 85
Max nTPM: 37.1
Min nTPM: 12.2
Std nTPM: 4.6
Median nTPM: 20.8
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
37.1
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
34.7
GTEX-T6MN-1826-SM-EXOHN
50-59 years, male
33.4
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
29.2
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
29.0
GTEX-1NV8Z-2226-SM-EXOJ2
60-69 years, male
28.4
GTEX-1JMQJ-1726-SM-E9U4V
50-59 years, male
28.0
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
27.3
GTEX-1I1GP-1926-SM-CNNQU
50-59 years, male
27.3
GTEX-O5YV-1226-SM-EV795
60-69 years, female
27.0
GTEX-1JMPZ-1226-SM-ARU8Y
30-39 years, male
26.2
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
26.1
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
25.8
GTEX-1N2DW-1826-SM-EAZ54
50-59 years, male
25.5
GTEX-1LG7Y-2726-SM-D5OVW
50-59 years, male
25.2
GTEX-1GF9W-1326-SM-7P8PX
60-69 years, male
25.1
GTEX-1IKK5-0926-SM-A9G2U
60-69 years, male
24.9
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
24.7
GTEX-1HB9E-1826-SM-D4P33
50-59 years, male
24.4
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
23.9
GTEX-1QP6S-1526-SM-EXUSG
40-49 years, male
23.8
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
23.7
GTEX-1K9T9-1826-SM-CXZK2
50-59 years, female
23.7
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
23.6
GTEX-1N2EF-1426-SM-EXUSH
60-69 years, male
23.6
GTEX-14C39-2126-SM-664OH
40-49 years, male
23.5
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
23.4
GTEX-1GMR3-2426-SM-7MXV2
40-49 years, male
23.3
GTEX-1GTWX-1826-SM-9QEHG
60-69 years, male
23.3
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
23.0
GTEX-1JJ6O-2526-SM-AHZ3J
60-69 years, male
22.7
GTEX-1CB4J-1926-SM-7MGX8
60-69 years, male
22.6
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
22.4
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
22.3
GTEX-1R9PO-1626-SM-E6CPT
60-69 years, female
22.3
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
21.9
GTEX-1GF9V-1926-SM-9JGHE
60-69 years, male
21.9
GTEX-1HCU7-1826-SM-A9G2A
50-59 years, male
21.6
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
21.4
GTEX-12696-0926-SM-5FQTV
60-69 years, male
21.2
GTEX-1F48J-2226-SM-7MXTN
50-59 years, female
21.0
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
20.8
GTEX-1J1OQ-1426-SM-AHZ3P
40-49 years, female
20.8
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
20.7
GTEX-1KWVE-0826-SM-CXZKO
30-39 years, male
20.5
GTEX-1OJC4-2326-SM-DTXA5
50-59 years, female
20.4
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
20.2
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
19.8
GTEX-REY6-1826-SM-EAZAT
60-69 years, male
19.7
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
19.6
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
19.3
GTEX-1GN1U-2126-SM-AHZ4J
50-59 years, female
18.9
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
18.8
GTEX-17F96-1926-SM-7MGWY
70-79 years, male
18.8
GTEX-1JMQK-1926-SM-CJI3B
60-69 years, male
18.8
GTEX-1PWST-2226-SM-EVR3G
70-79 years, male
18.8
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
18.7
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
18.7
GTEX-1E2YA-1626-SM-7MGXS
50-59 years, male
18.6
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
18.5
GTEX-1H3NZ-2126-SM-9WPQ6
60-69 years, male
18.5
GTEX-S33H-1426-SM-EZ6L7
30-39 years, male
18.5
GTEX-1HBPI-2026-SM-CE6RZ
50-59 years, male
18.2
GTEX-1A8FM-2026-SM-7P8RN
50-59 years, female
17.9
GTEX-1H3VY-1926-SM-9JGHJ
50-59 years, male
17.8
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
17.4
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
17.4
GTEX-1JMLX-1526-SM-AHZ3N
50-59 years, male
17.3
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
17.1
GTEX-1IL2V-1826-SM-ARU7R
70-79 years, male
17.1
GTEX-QLQW-1626-SM-CMKFE
30-39 years, male
17.0
GTEX-13112-2126-SM-5GCO4
50-59 years, male
16.9
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
16.9
GTEX-QDT8-1726-SM-EYYV6
30-39 years, female
16.9
GTEX-Y5V5-1226-SM-EYYVP
60-69 years, female
16.7
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
16.5
GTEX-RN64-1626-SM-48FD7
50-59 years, male
16.5
GTEX-1MUQO-2526-SM-E9TJN
60-69 years, male
16.4
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
15.6
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
15.4
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
15.3
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
15.3
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
14.7
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
12.6
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
12.2
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Kidney - Medulla Average nTPM: 26.7
Samples: 4
Max nTPM: 38.7
Min nTPM: 17.6
Std nTPM: 9.0
Median nTPM: 25.3
GTEX-T5JC-1626-SM-EZ6KW
20-29 years, male
38.7
GTEX-RU72-1926-SM-EAZ3F
50-59 years, female
32.3
GTEX-R55E-2026-SM-EZ6L1
20-29 years, male
18.3
GTEX-TKQ2-0626-SM-EZ6LB
50-59 years, male
17.6
KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
