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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Squamous epithelial cells:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
8.8
nTPM
GTEx:
8.8
nTPM
FANTOM5:
34.1
Scaled Tags Per Million
VAGINA - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA030515
Squamous epithelial cells
Not detected
VAGINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
8.8
GTEx sample id
Sample description
nTPM
Vagina Average nTPM: 8.8
Samples: 156
Max nTPM: 18.6
Min nTPM: 4.3
Std nTPM: 2.8
Median nTPM: 8.2
GTEX-1J8EW-2526-SM-CKZO2
60-69 years, female
18.6
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
18.2
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
17.2
GTEX-1HBPM-2726-SM-9WYUA
60-69 years, female
15.2
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
15.1
GTEX-1HBPH-2926-SM-9WPNX
40-49 years, female
15.1
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
14.8
GTEX-1LVAN-1626-SM-CNPQ7
50-59 years, female
14.4
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
14.1
GTEX-1IDJU-1026-SM-AHZ2U
60-69 years, female
14.1
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
13.7
GTEX-11I78-2026-SM-5987C
50-59 years, female
13.7
GTEX-1LNCM-1026-SM-E9U5D
50-59 years, female
13.3
GTEX-1A8FM-2426-SM-7IGPE
50-59 years, female
12.9
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
12.7
GTEX-1QP28-1426-SM-EVR4E
50-59 years, female
12.7
GTEX-1J1OQ-1826-SM-CL53R
40-49 years, female
12.6
GTEX-15ER7-2526-SM-7KUFW
20-29 years, female
12.5
GTEX-17F9Y-2326-SM-7DUFP
70-79 years, female
12.3
GTEX-1HCU8-2026-SM-9YFLE
60-69 years, female
12.3
GTEX-18A7A-2826-SM-7LT8J
50-59 years, female
12.1
GTEX-1PIEJ-1926-SM-EVYB7
20-29 years, female
12.1
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
12.0
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
11.9
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
11.9
GTEX-1GF9U-1926-SM-7P8TZ
40-49 years, female
11.7
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
11.6
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
11.6
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
11.6
GTEX-15SDE-1726-SM-6LPJS
50-59 years, female
11.5
GTEX-QVJO-2526-SM-CYPRA
60-69 years, female
11.4
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
11.3
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
11.0
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
10.9
GTEX-15SHU-2926-SM-7KUKT
40-49 years, female
10.8
GTEX-1LVAM-1926-SM-E6CIM
50-59 years, female
10.8
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
10.7
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
10.6
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
10.6
GTEX-1NUQO-1826-SM-E6CQU
20-29 years, female
10.6
GTEX-14PJ6-1626-SM-6872D
60-69 years, female
10.5
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
10.2
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
10.1
GTEX-Q734-1426-SM-DTXFX
40-49 years, female
10.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
10.0
GTEX-14PN3-1626-SM-6AJAV
60-69 years, female
9.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
9.8
GTEX-SN8G-2626-SM-EXUQT
50-59 years, female
9.7
GTEX-1CAMS-2326-SM-793CR
40-49 years, female
9.6
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
9.6
GTEX-1HFI7-1126-SM-A96S5
50-59 years, female
9.6
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
9.5
GTEX-15SB6-1426-SM-7KUEM
50-59 years, female
9.4
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
9.3
GTEX-1GN1W-1526-SM-7P8TG
50-59 years, female
9.3
GTEX-QCQG-1226-SM-48U23
50-59 years, female
9.2
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
9.2
GTEX-XUZC-1226-SM-4BRVJ
30-39 years, female
9.2
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
9.1
GTEX-1JN76-1526-SM-CNPPF
20-29 years, female
9.1
GTEX-1C475-0526-SM-793AC
40-49 years, female
9.0
GTEX-1GN1U-2426-SM-9KNTU
50-59 years, female
9.0
GTEX-1ICG6-1626-SM-ARL81
70-79 years, female
9.0
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
8.8
GTEX-1HCUA-1026-SM-A9SMI
50-59 years, female
8.8
GTEX-1JN1M-2326-SM-ARZNG
60-69 years, female
8.8
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
8.7
GTEX-1HCU6-2326-SM-ACKXP
60-69 years, female
8.7
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
8.6
GTEX-18D9A-1026-SM-7KFRU
30-39 years, female
8.5
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
8.5
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
8.4
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
8.4
GTEX-1EWIQ-2326-SM-7IGNF
70-79 years, female
8.4
GTEX-1I4MK-1726-SM-ARL7O
50-59 years, female
8.4
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
8.2
GTEX-14H4A-2426-SM-664OQ
40-49 years, female
8.2
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
8.2
GTEX-1R9JW-1426-SM-DTX9K
30-39 years, female
8.2
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
8.1
GTEX-1MCYP-1326-SM-EV7AD
20-29 years, female
8.1
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
8.0
GTEX-14JG6-0726-SM-69LQH
30-39 years, female
8.0
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
8.0
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
7.9
GTEX-17JCI-2526-SM-7DHLB
60-69 years, female
7.9
GTEX-1F48J-2526-SM-7P8TU
50-59 years, female
7.9
GTEX-1I1GT-1226-SM-B2LVK
60-69 years, female
7.9
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
7.8
GTEX-183WM-2126-SM-7LG4I
70-79 years, female
7.8
GTEX-S341-1226-SM-4AD5S
40-49 years, female
7.8
GTEX-1IE54-2626-SM-CMKFY
40-49 years, female
7.8
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
7.7
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
7.7
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
7.6
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
7.6
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
7.6
GTEX-1F5PL-1826-SM-7P8PP
40-49 years, female
7.6
GTEX-14PKU-1326-SM-6871B
40-49 years, female
7.5
GTEX-1LGRB-2126-SM-COH48
50-59 years, female
7.5
GTEX-OHPN-2426-SM-E9TI5
60-69 years, female
7.5
GTEX-145LS-2526-SM-5TDC9
60-69 years, female
7.4
GTEX-1S5ZU-2626-SM-E9TII
20-29 years, female
7.4
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
7.3
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
7.3
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
7.3
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
7.3
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
7.3
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
7.3
GTEX-1GMR8-2526-SM-7RHI9
50-59 years, female
7.3
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
7.2
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
7.2
GTEX-ZAK1-2426-SM-EXOHM
50-59 years, female
7.2
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
7.1
GTEX-1QCLZ-2226-SM-DTX7R
60-69 years, female
7.1
GTEX-1QPFJ-1626-SM-DTX7X
30-39 years, female
7.1
GTEX-15DYW-2926-SM-6PANA
60-69 years, female
7.0
GTEX-1LGOU-1126-SM-D3LAI
20-29 years, female
7.0
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
6.8
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
6.8
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
6.8
GTEX-16NGA-1626-SM-72D6M
40-49 years, female
6.7
GTEX-14PJM-2926-SM-69LOE
50-59 years, female
6.5
GTEX-1LH75-1726-SM-DHXKZ
50-59 years, female
6.5
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
6.4
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
6.4
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
6.4
GTEX-WYVS-1426-SM-4ONCV
40-49 years, female
6.3
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
6.3
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
6.2
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
6.1
GTEX-1AMFI-1526-SM-73KVY
50-59 years, female
6.1
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
6.1
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
6.1
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
5.8
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
5.7
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
5.6
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
5.5
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
5.4
GTEX-15UF6-2126-SM-6M46Z
70-79 years, female
5.4
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
5.4
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
5.4
GTEX-1MCC2-1126-SM-EVYD6
30-39 years, female
5.3
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
5.2
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
5.1
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
5.1
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
5.0
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
5.0
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
4.9
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
4.9
GTEX-16NPV-2526-SM-6M483
50-59 years, female
4.9
GTEX-1JMQL-2326-SM-CNNPV
50-59 years, female
4.8
GTEX-NPJ7-2526-SM-EV79A
60-69 years, female
4.7
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
4.5
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
4.3
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
4.3
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VAGINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.