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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in red pulp:
Low
Cells in white pulp:
Low
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
34.8
nTPM
HPA:
34.8
nTPM
GTEx:
28.6
nTPM
FANTOM5:
69.3
Scaled Tags Per Million
SPLEEN - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA041275
Antibody CAB010895
Cells in red pulp
Low
Low
Cells in white pulp
Low
Low
SPLEEN - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPM
34.8
Female, age 60
Spleen sample 236 nTPM: 29.2
Cell types%
Lymphocytes:
40
Macrophages:
30
Endothelial cells:
15
Fibroblasts:
5
Other cell types:
10
Male, age 17
Spleen sample 237 nTPM: 27.1
Cell types%
Lymphocytes:
40
Macrophages:
35
Endothelial cells:
15
Fibroblasts:
5
Other cell types:
5
Male, age 20
Spleen sample 238 nTPM: 28.7
Cell types%
Lymphocytes:
40
Macrophages:
30
Endothelial cells:
15
Fibroblasts:
5
Other cell types:
10
Female, age 19
Spleen sample 239 nTPM: 34.5
Cell types%
Lymphocytes:
40
Macrophages:
30
Endothelial cells:
15
Fibroblasts:
10
Other cell types:
5
Female, age 65
Spleen sample 378 nTPM: 54.8
Cell types%
Lymphocytes:
35
Macrophages:
30
Endothelial cells:
20
Fibroblasts:
10
Other cell types:
5
SPLEEN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
28.6
GTEx sample id
Sample description
nTPM
Spleen Average nTPM: 28.6
Samples: 241
Max nTPM: 55.0
Min nTPM: 16.3
Std nTPM: 6.1
Median nTPM: 27.9
GTEX-ZEX8-0726-SM-4WKH8
50-59 years, male
55.0
GTEX-1IDJE-0126-SM-C1YQ6
50-59 years, female
54.2
GTEX-1QP66-0126-SM-EAZ3N
50-59 years, male
51.1
GTEX-18A66-1826-SM-7KFSU
60-69 years, male
48.7
GTEX-1A3MV-0126-SM-731FQ
30-39 years, male
47.2
GTEX-1H3VY-1526-SM-9WG7S
50-59 years, male
44.8
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
44.5
GTEX-1RAZA-1026-SM-E6CQ9
20-29 years, male
39.9
GTEX-1B97J-1926-SM-7IGQB
50-59 years, female
39.7
GTEX-15SDE-0126-SM-793BA
50-59 years, female
39.6
GTEX-1MCYP-0226-SM-EV7A3
20-29 years, female
39.6
GTEX-QMRM-0226-SM-CL55S
50-59 years, male
39.2
GTEX-14PN3-0226-SM-6871K
60-69 years, female
39.0
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
38.8
GTEX-1AMFI-0926-SM-731E4
50-59 years, female
38.5
GTEX-OIZF-0926-SM-7MKH7
60-69 years, male
38.3
GTEX-1R9JW-0126-SM-EAZ4P
30-39 years, female
38.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
38.0
GTEX-15SB6-0126-SM-6LPJR
50-59 years, female
37.9
GTEX-1LVAN-1026-SM-CNNQZ
50-59 years, female
37.4
GTEX-WYVS-0126-SM-4ONDH
40-49 years, female
37.2
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
36.4
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
36.1
GTEX-1RAZQ-0126-SM-EV7B1
30-39 years, male
36.1
GTEX-17HHE-0326-SM-793BH
50-59 years, male
36.0
GTEX-ZPCL-0626-SM-DNZZ6
60-69 years, female
35.9
GTEX-1C4CL-0626-SM-731DM
30-39 years, male
35.6
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
35.4
GTEX-1HCU7-1426-SM-CNNQK
50-59 years, male
35.4
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
35.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
35.0
GTEX-14BMU-0426-SM-73KYT
20-29 years, female
34.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
34.8
GTEX-ZTTD-1726-SM-57WEL
50-59 years, male
34.8
GTEX-1GZ4H-0126-SM-9JGGI
50-59 years, female
34.8
GTEX-111CU-0426-SM-5GZY1
50-59 years, male
34.6
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
34.6
GTEX-1RNTQ-1026-SM-EV7B4
20-29 years, female
34.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
33.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
33.6
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
33.6
GTEX-1JKYN-0326-SM-AHZ4D
30-39 years, male
33.6
GTEX-1QCLY-0126-SM-DPRZV
30-39 years, male
33.6
GTEX-15RJ7-0126-SM-6LPJN
40-49 years, male
33.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
33.3
GTEX-1R9K5-1126-SM-EAZ4G
50-59 years, male
33.2
GTEX-14E1K-0126-SM-664NL
50-59 years, male
33.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
32.6
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
32.6
GTEX-1B8KZ-0226-SM-7EWF6
50-59 years, male
32.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
32.6
GTEX-1J8QM-0926-SM-C1YQ9
60-69 years, female
32.6
GTEX-1R7EV-0126-SM-EAZ3O
40-49 years, male
32.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
32.2
GTEX-15F5U-0126-SM-6LPKA
40-49 years, male
32.2
GTEX-1CB4F-0226-SM-7EPHS
60-69 years, male
32.2
GTEX-1C475-1126-SM-7MGY7
40-49 years, female
32.2
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
32.1
GTEX-1LG7Z-0126-SM-EV79V
30-39 years, male
32.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
31.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
31.9
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
31.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
31.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
31.4
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
31.2
GTEX-13OVK-0426-SM-7KFT8
40-49 years, male
31.1
GTEX-ZF2S-0326-SM-4WKGD
50-59 years, female
31.1
GTEX-1QP29-0126-SM-EAZ3S
50-59 years, male
31.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
30.9
GTEX-15UF7-1926-SM-6LPJT
40-49 years, male
30.8
GTEX-ZF29-0626-SM-4WKHD
60-69 years, female
30.8
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
30.7
GTEX-1J8Q3-0126-SM-C1YSI
60-69 years, male
30.7
GTEX-QESD-0126-SM-EXOHG
20-29 years, male
30.7
GTEX-15DZA-0126-SM-6PAMV
30-39 years, female
30.6
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
30.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
30.6
GTEX-1LSVX-1426-SM-DHXJO
60-69 years, male
30.6
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
30.5
GTEX-1R7EU-2026-SM-E9U63
60-69 years, male
30.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
30.4
GTEX-1HSMQ-0126-SM-D4P2I
50-59 years, male
30.4
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
30.3
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
30.3
GTEX-1IDJC-0126-SM-C1YQC
50-59 years, male
30.3
GTEX-1RMOY-0726-SM-EV79D
50-59 years, male
30.3
GTEX-1LSNM-0126-SM-EAZ57
50-59 years, male
30.1
GTEX-P78B-1226-SM-EZ6KP
40-49 years, female
30.1
GTEX-1CB4E-0126-SM-7DHMX
60-69 years, male
29.9
GTEX-1F5PL-2226-SM-7MKHE
40-49 years, female
29.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
29.8
GTEX-1K9T9-0626-SM-CXZKY
50-59 years, female
29.7
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
29.5
GTEX-1CB4I-1426-SM-79OLZ
50-59 years, male
29.5
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
29.5
GTEX-1RAZR-1626-SM-EAZ4V
40-49 years, male
29.5
GTEX-1LGRB-0126-SM-CNNR6
50-59 years, female
29.3
GTEX-14PJ6-0226-SM-6AJ9K
60-69 years, female
29.2
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
29.1
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
29.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
29.0
GTEX-14PJ4-0526-SM-6871G
60-69 years, male
29.0
GTEX-1K2DA-0126-SM-CGQGV
50-59 years, male
29.0
GTEX-12WSD-1726-SM-5GCN4
60-69 years, female
28.9
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
28.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
28.8
GTEX-14ICL-0126-SM-664NG
30-39 years, male
28.6
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
28.5
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
28.3
GTEX-15RIG-0126-SM-6PAN4
40-49 years, male
28.3
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
28.3
GTEX-1GF9U-0126-SM-AHZ4G
40-49 years, female
28.3
GTEX-16XZY-0126-SM-7IGQ9
70-79 years, male
28.2
GTEX-14PKU-0526-SM-6871A
40-49 years, female
28.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
28.0
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
28.0
GTEX-18A67-1526-SM-7LG6F
50-59 years, male
28.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
28.0
GTEX-1PWST-1626-SM-EXOIU
70-79 years, male
28.0
GTEX-ZPIC-0126-SM-DNZZ9
40-49 years, female
28.0
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
27.9
GTEX-15SHV-0126-SM-6LPIS
60-69 years, male
27.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
27.9
GTEX-169BO-0126-SM-79OLS
50-59 years, male
27.8
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
27.7
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
27.7
GTEX-17GQL-0126-SM-72D5Q
60-69 years, male
27.6
GTEX-14PK6-0526-SM-69LOF
70-79 years, female
27.5
GTEX-15CHQ-1226-SM-6ETZL
60-69 years, male
27.5
GTEX-1C6VQ-2126-SM-7IGNL
50-59 years, male
27.5
GTEX-1HCU9-0126-SM-9WG7M
20-29 years, male
27.5
GTEX-QV44-0126-SM-CJI1X
50-59 years, male
27.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
27.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
27.3
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
27.1
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
27.0
GTEX-14JG6-0226-SM-6872A
30-39 years, female
27.0
GTEX-1L5NE-0926-SM-D4P3P
50-59 years, male
27.0
GTEX-1MGNQ-1126-SM-EAZ4Y
40-49 years, male
27.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
26.9
GTEX-1JK1U-0126-SM-C1YQY
60-69 years, male
26.9
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
26.8
GTEX-15ER7-1526-SM-6LLHO
20-29 years, female
26.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
26.7
GTEX-P4QT-0926-SM-EZ6KQ
50-59 years, female
26.7
GTEX-1FIGZ-0126-SM-7MKGZ
40-49 years, male
26.6
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
26.6
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
26.4
GTEX-15ETS-3126-SM-6LPKN
40-49 years, female
26.4
GTEX-1F75I-0226-SM-7MKHQ
40-49 years, male
26.4
GTEX-13111-0126-SM-5EGHO
50-59 years, male
26.3
GTEX-1B97I-0126-SM-731DH
40-49 years, male
26.3
GTEX-1QP2A-2526-SM-EXOJB
50-59 years, male
26.3
GTEX-15DYW-1426-SM-6LPIW
60-69 years, female
26.2
GTEX-ZG7Y-2026-SM-DO91N
50-59 years, male
26.2
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
26.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
26.0
GTEX-15RIF-0526-SM-6LLI2
20-29 years, male
25.9
GTEX-17F9E-1126-SM-79OMO
50-59 years, male
25.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
25.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
25.3
GTEX-1JMLX-1426-SM-CNNPO
50-59 years, male
25.3
GTEX-1QCLZ-1026-SM-E6CR1
60-69 years, female
25.3
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
25.2
GTEX-1QW4Y-0126-SM-DPRZQ
30-39 years, male
25.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
25.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
25.0
GTEX-14PJ5-0326-SM-664OD
60-69 years, female
25.0
GTEX-15CHC-0726-SM-6AJ9D
60-69 years, female
25.0
GTEX-1AX9K-0226-SM-793CM
50-59 years, male
25.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
25.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
24.9
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
24.8
GTEX-1OFPY-0126-SM-EXOJ3
60-69 years, male
24.8
GTEX-1C64O-1626-SM-731EN
60-69 years, male
24.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
24.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
24.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
24.4
GTEX-1PDJ9-0226-SM-DPRYX
20-29 years, male
24.4
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
24.3
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
24.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
24.1
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
24.1
GTEX-1JMQK-1126-SM-CXZJW
60-69 years, male
24.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
24.0
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
24.0
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
24.0
GTEX-1JMPZ-0926-SM-CXZJR
30-39 years, male
23.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
23.8
GTEX-1KAFJ-1026-SM-D4P2Z
50-59 years, male
23.8
GTEX-1MJK3-0126-SM-DPRYY
20-29 years, male
23.5
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
23.4
GTEX-111FC-1326-SM-5N9D9
60-69 years, male
23.3
GTEX-1R9PM-0126-SM-DPRY6
20-29 years, male
23.3
GTEX-1JKYR-1126-SM-CGQGJ
20-29 years, male
23.2
GTEX-144GN-2126-SM-5O99D
50-59 years, male
23.1
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
22.9
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
22.9
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
22.8
GTEX-17F98-0126-SM-7MGW3
40-49 years, female
22.8
GTEX-1KD5A-1526-SM-D4P3W
50-59 years, male
22.8
GTEX-P4PQ-0926-SM-E9U4D
60-69 years, male
22.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
22.7
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
22.7
GTEX-1KANA-1226-SM-DHXKE
20-29 years, male
22.6
GTEX-QDT8-1526-SM-EXOHP
30-39 years, female
22.3
GTEX-1AYD5-0226-SM-79ONV
50-59 years, male
22.2
GTEX-16MT8-1826-SM-7EWE8
60-69 years, female
22.1
GTEX-17F96-1426-SM-7IGQA
70-79 years, male
22.1
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
22.1
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
22.0
GTEX-WXYG-0126-SM-4OND7
50-59 years, female
22.0
GTEX-1LNCM-0426-SM-DHXK6
50-59 years, female
22.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
21.9
GTEX-1MCC2-0826-SM-EV7AM
30-39 years, female
21.9
GTEX-R55C-0126-SM-48FEQ
40-49 years, male
21.8
GTEX-1QMI2-1526-SM-EXOJT
60-69 years, male
21.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
21.6
GTEX-1R9K4-1526-SM-DPRY5
60-69 years, male
21.6
GTEX-Y5V5-1126-SM-EVYAR
60-69 years, female
21.6
GTEX-1QAET-2326-SM-EXOJ1
50-59 years, male
21.4
GTEX-1N2EF-1526-SM-EXOIY
60-69 years, male
21.3
GTEX-1PIIG-1226-SM-EXOIQ
30-39 years, male
21.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
21.2
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
21.2
GTEX-1F5PK-0726-SM-7MGXN
50-59 years, male
21.1
GTEX-1S831-0726-SM-EV79O
20-29 years, male
21.0
GTEX-WY7C-0126-SM-4ONCO
50-59 years, male
20.8
GTEX-NFK9-1426-SM-43ISG
40-49 years, male
20.7
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
20.5
GTEX-WYJK-0726-SM-4ONC9
50-59 years, male
20.3
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
20.2
GTEX-1MUQO-1326-SM-EV7AE
60-69 years, male
20.1
GTEX-16MT9-1726-SM-6M47P
60-69 years, female
19.8
GTEX-1PPH7-0126-SM-E6CPB
40-49 years, male
19.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
19.5
GTEX-X585-1826-SM-4QAS3
50-59 years, male
19.5
GTEX-1H3O1-1126-SM-9WPO9
60-69 years, male
19.5
GTEX-ZDYS-1026-SM-4WKHC
50-59 years, male
18.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
18.7
GTEX-17F97-1626-SM-72D6W
50-59 years, male
16.3
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SPLEEN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
