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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Squamous epithelial cells:
High
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
160.9
nTPM
GTEx:
160.9
nTPM
FANTOM5:
203.9
Scaled Tags Per Million
VAGINA - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA015971
Squamous epithelial cells
High
VAGINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
160.9
GTEx sample id
Sample description
nTPM
Vagina Average nTPM: 160.9
Samples: 156
Max nTPM: 317.0
Min nTPM: 103.7
Std nTPM: 38.0
Median nTPM: 151.6
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
317.0
GTEX-1S5ZU-2626-SM-E9TII
20-29 years, female
293.5
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
271.5
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
271.5
GTEX-1JMQL-2326-SM-CNNPV
50-59 years, female
270.7
GTEX-1JN1M-2326-SM-ARZNG
60-69 years, female
240.5
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
238.5
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
233.7
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
229.8
GTEX-1LNCM-1026-SM-E9U5D
50-59 years, female
226.1
GTEX-15UF6-2126-SM-6M46Z
70-79 years, female
225.3
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
221.8
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
220.0
GTEX-183WM-2126-SM-7LG4I
70-79 years, female
219.3
GTEX-NPJ7-2526-SM-EV79A
60-69 years, female
215.4
GTEX-14JG6-0726-SM-69LQH
30-39 years, female
214.4
GTEX-16NPV-2526-SM-6M483
50-59 years, female
207.9
GTEX-1GN1U-2426-SM-9KNTU
50-59 years, female
203.9
GTEX-17JCI-2526-SM-7DHLB
60-69 years, female
203.8
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
200.8
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
200.6
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
199.0
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
198.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
198.3
GTEX-1EWIQ-2326-SM-7IGNF
70-79 years, female
197.0
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
196.8
GTEX-1HCU8-2026-SM-9YFLE
60-69 years, female
195.7
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
189.0
GTEX-SN8G-2626-SM-EXUQT
50-59 years, female
188.7
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
187.9
GTEX-1NUQO-1826-SM-E6CQU
20-29 years, female
187.9
GTEX-1GMR8-2526-SM-7RHI9
50-59 years, female
187.7
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
187.5
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
185.3
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
185.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
184.9
GTEX-1QPFJ-1626-SM-DTX7X
30-39 years, female
182.3
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
180.7
GTEX-1HBPM-2726-SM-9WYUA
60-69 years, female
180.5
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
180.0
GTEX-1LH75-1726-SM-DHXKZ
50-59 years, female
180.0
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
179.9
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
179.6
GTEX-1A8FM-2426-SM-7IGPE
50-59 years, female
178.6
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
178.1
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
176.4
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
175.9
GTEX-15DYW-2926-SM-6PANA
60-69 years, female
172.2
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
169.4
GTEX-1AMFI-1526-SM-73KVY
50-59 years, female
168.5
GTEX-OHPN-2426-SM-E9TI5
60-69 years, female
168.4
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
167.9
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
165.1
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
164.1
GTEX-1F48J-2526-SM-7P8TU
50-59 years, female
162.9
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
162.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
162.4
GTEX-QCQG-1226-SM-48U23
50-59 years, female
162.3
GTEX-17F9Y-2326-SM-7DUFP
70-79 years, female
162.0
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
161.9
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
161.6
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
160.6
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
160.5
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
160.3
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
159.9
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
159.6
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
157.3
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
156.8
GTEX-1QP28-1426-SM-EVR4E
50-59 years, female
156.7
GTEX-1HCU6-2326-SM-ACKXP
60-69 years, female
156.3
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
156.2
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
155.8
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
153.7
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
152.8
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
152.5
GTEX-1HFI7-1126-SM-A96S5
50-59 years, female
152.3
GTEX-1LGRB-2126-SM-COH48
50-59 years, female
151.8
GTEX-15SHU-2926-SM-7KUKT
40-49 years, female
151.7
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
151.5
GTEX-15ER7-2526-SM-7KUFW
20-29 years, female
150.5
GTEX-1I1GT-1226-SM-B2LVK
60-69 years, female
150.5
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
150.4
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
148.8
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
148.8
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
148.3
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
146.9
GTEX-1R9JW-1426-SM-DTX9K
30-39 years, female
146.7
GTEX-18D9A-1026-SM-7KFRU
30-39 years, female
146.3
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
146.3
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
146.2
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
145.8
GTEX-1IE54-2626-SM-CMKFY
40-49 years, female
145.6
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
144.8
GTEX-145LS-2526-SM-5TDC9
60-69 years, female
144.4
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
143.7
GTEX-1C475-0526-SM-793AC
40-49 years, female
143.7
GTEX-1PIEJ-1926-SM-EVYB7
20-29 years, female
143.7
GTEX-1I4MK-1726-SM-ARL7O
50-59 years, female
143.5
GTEX-1F5PL-1826-SM-7P8PP
40-49 years, female
143.3
GTEX-1HBPH-2926-SM-9WPNX
40-49 years, female
142.8
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
141.8
GTEX-1HCUA-1026-SM-A9SMI
50-59 years, female
141.6
GTEX-XUZC-1226-SM-4BRVJ
30-39 years, female
141.6
GTEX-ZAK1-2426-SM-EXOHM
50-59 years, female
141.1
GTEX-Q734-1426-SM-DTXFX
40-49 years, female
140.7
GTEX-WYVS-1426-SM-4ONCV
40-49 years, female
139.7
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
139.3
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
139.2
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
137.9
GTEX-11I78-2026-SM-5987C
50-59 years, female
137.5
GTEX-14PJM-2926-SM-69LOE
50-59 years, female
137.2
GTEX-14PJ6-1626-SM-6872D
60-69 years, female
137.1
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
137.1
GTEX-1LVAN-1626-SM-CNPQ7
50-59 years, female
136.7
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
136.5
GTEX-1J8EW-2526-SM-CKZO2
60-69 years, female
136.2
GTEX-1J1OQ-1826-SM-CL53R
40-49 years, female
135.7
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
134.9
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
134.9
GTEX-1LVAM-1926-SM-E6CIM
50-59 years, female
133.9
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
133.7
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
133.4
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
133.3
GTEX-1GN1W-1526-SM-7P8TG
50-59 years, female
133.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
132.6
GTEX-1CAMS-2326-SM-793CR
40-49 years, female
130.6
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
129.5
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
129.0
GTEX-18A7A-2826-SM-7LT8J
50-59 years, female
128.2
GTEX-S341-1226-SM-4AD5S
40-49 years, female
128.2
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
127.3
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
127.0
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
126.3
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
124.8
GTEX-15SB6-1426-SM-7KUEM
50-59 years, female
123.8
GTEX-1MCC2-1126-SM-EVYD6
30-39 years, female
123.4
GTEX-14PN3-1626-SM-6AJAV
60-69 years, female
123.2
GTEX-14H4A-2426-SM-664OQ
40-49 years, female
122.0
GTEX-QVJO-2526-SM-CYPRA
60-69 years, female
121.4
GTEX-1LGOU-1126-SM-D3LAI
20-29 years, female
121.3
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
120.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
120.7
GTEX-15SDE-1726-SM-6LPJS
50-59 years, female
120.4
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
120.1
GTEX-1MCYP-1326-SM-EV7AD
20-29 years, female
119.3
GTEX-1IDJU-1026-SM-AHZ2U
60-69 years, female
118.3
GTEX-1ICG6-1626-SM-ARL81
70-79 years, female
117.9
GTEX-14PKU-1326-SM-6871B
40-49 years, female
115.9
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
115.3
GTEX-1QCLZ-2226-SM-DTX7R
60-69 years, female
115.3
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
112.4
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
111.7
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
108.6
GTEX-1JN76-1526-SM-CNPPF
20-29 years, female
108.0
GTEX-1GF9U-1926-SM-7P8TZ
40-49 years, female
105.5
GTEX-16NGA-1626-SM-72D6M
40-49 years, female
103.7
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VAGINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.