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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
High
Neuronal cells:
High
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
25.5
nTPM
GTEx:
31.2
nTPM
FANTOM5:
13.2
Scaled Tags Per Million
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA035159
Antibody HPA035160
Glial cells
Medium
High
Neuronal cells
Low
High
HIPPOCAMPUS - HPA Brain RNA-seq
Avg nTPM
25.5
Sample id
Sample description
nTPM
Hippocampus nTPM: 25.5
2529
Female, age 94, left hemisphere
27.1
2621
Female, age 67, right hemisphere
27.0
1898
Male, age 80, left hemisphere
26.4
1911
Female, age 85, right hemisphere
25.2
2148
Female, age 91, left hemisphere
24.0
1855
Male, age 76, left hemisphere
23.1
HIPPOCAMPUS - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
31.2
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 31.2
Samples: 197
Max nTPM: 61.3
Min nTPM: 16.3
Std nTPM: 6.3
Median nTPM: 30.3
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
61.3
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
51.3
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
50.9
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
46.9
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
46.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
45.9
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
44.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
43.8
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
43.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
42.8
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
42.3
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
42.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
41.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
41.0
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
40.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
40.1
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
40.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
40.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
39.5
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
39.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
39.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
39.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
39.3
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
39.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
39.1
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
38.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
37.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
37.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
37.5
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
37.5
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
37.1
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
37.0
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
36.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
36.8
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
36.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
36.4
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
36.2
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
35.9
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
35.9
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
35.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
35.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
35.1
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
35.0
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
34.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
34.7
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
34.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
34.5
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
34.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
34.4
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
34.3
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
34.3
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
34.3
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
33.9
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
33.7
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
33.7
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
33.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
33.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
33.4
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
33.4
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
33.2
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
33.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
33.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
33.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
32.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
32.9
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
32.8
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
32.8
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
32.8
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
32.7
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
32.6
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
32.3
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
32.3
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
32.1
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
32.1
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
32.1
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
32.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
32.1
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
32.0
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
31.9
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
31.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
31.7
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
31.6
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
31.6
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
31.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
31.5
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
31.4
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
31.4
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
31.1
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
31.0
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
31.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
30.7
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
30.6
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
30.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
30.4
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
30.4
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
30.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
30.3
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
30.3
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
30.3
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
30.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
30.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
30.1
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
30.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
30.0
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
29.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
29.9
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
29.9
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
29.8
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
29.8
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
29.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
29.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
29.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
29.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
29.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
28.9
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
28.9
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
28.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
28.8
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
28.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
28.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
28.4
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
28.4
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
28.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
28.3
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
28.3
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
28.1
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
28.1
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
28.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
28.0
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
28.0
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
27.9
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
27.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
27.9
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
27.8
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
27.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
27.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
27.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
27.7
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
27.7
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
27.7
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
27.5
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
27.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
27.3
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
27.3
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
27.3
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
27.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
27.2
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
27.2
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
27.2
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
27.0
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
27.0
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
27.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
26.8
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
26.8
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
26.8
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
26.7
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
26.7
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
26.6
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
26.6
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
26.5
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
26.4
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
26.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
26.3
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
26.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
26.3
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
26.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
25.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
25.8
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
25.7
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
25.6
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
25.4
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
25.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
25.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
25.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
24.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
24.5
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
24.4
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
24.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
23.9
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
23.8
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
23.8
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
23.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
23.3
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
23.2
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
23.1
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
22.8
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
22.6
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
22.4
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
22.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
22.1
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
21.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
20.9
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
20.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
20.4
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
20.4
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
18.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
16.3
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HIPPOCAMPUS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
