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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in glomeruli:
Low
Cells in tubules:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
76.0
nTPM
HPA:
76.0
nTPM
GTEx:
61.5
nTPM
FANTOM5:
78.9
Scaled Tags Per Million
KIDNEY - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA043761
Cells in glomeruli
Low
Cells in tubules
Medium
KIDNEY - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPM
76.0
Female, age 58
Kidney sample 55 nTPM: 70.4
Cell types%
Cells in tubules:
60
Cells in glomeruli:
20
Fibroblasts:
5
Other cell types:
15
Female, age 67
Kidney sample 56 nTPM: 65.6
Cell types%
Cells in tubules:
70
Cells in glomeruli:
15
Fibroblasts:
10
Other cell types:
5
Female, age 55
Kidney sample 57 nTPM: 49.2
Cell types%
Cells in tubules:
80
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
5
Male, age 46
Kidney sample 58 nTPM: 73.4
Cell types%
Cells in tubules:
60
Cells in glomeruli:
25
Fibroblasts:
5
Other cell types:
10
Female, age 57
Kidney sample 358 nTPM: 89.2
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Male, age 78
Kidney sample 377 nTPM: 72.7
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
20
Male, age 73
Kidney sample 380 nTPM: 134.5
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Female, age 59
Kidney sample 394 nTPM: 51.7
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
15
Female, age 48
Kidney sample 414 nTPM: 77.1
Cell types%
Cells in tubules:
60
Cells in glomeruli:
5
Fibroblasts:
10
Other cell types:
25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
61.5
GTEx sample id
Sample description
nTPM
Kidney - Cortex Average nTPM: 61.5
Samples: 85
Max nTPM: 131.2
Min nTPM: 33.6
Std nTPM: 19.8
Median nTPM: 58.2
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
131.2
GTEX-T6MN-1826-SM-EXOHN
50-59 years, male
122.6
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
120.6
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
103.0
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
93.4
GTEX-1JMQJ-1726-SM-E9U4V
50-59 years, male
92.8
GTEX-1NV8Z-2226-SM-EXOJ2
60-69 years, male
91.4
GTEX-1JMPZ-1226-SM-ARU8Y
30-39 years, male
87.5
GTEX-1KWVE-0826-SM-CXZKO
30-39 years, male
83.8
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
83.7
GTEX-1R9PO-1626-SM-E6CPT
60-69 years, female
83.4
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
83.1
GTEX-1GTWX-1826-SM-9QEHG
60-69 years, male
80.8
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
80.0
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
76.0
GTEX-1K9T9-1826-SM-CXZK2
50-59 years, female
74.3
GTEX-17F96-1926-SM-7MGWY
70-79 years, male
74.0
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
73.9
GTEX-1QP6S-1526-SM-EXUSG
40-49 years, male
73.8
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
72.7
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
72.6
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
72.3
GTEX-1PWST-2226-SM-EVR3G
70-79 years, male
72.0
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
71.8
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
71.4
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
69.7
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
67.5
GTEX-1JMQK-1926-SM-CJI3B
60-69 years, male
67.2
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
66.5
GTEX-1GF9V-1926-SM-9JGHE
60-69 years, male
66.2
GTEX-1J1OQ-1426-SM-AHZ3P
40-49 years, female
65.5
GTEX-1N2DW-1826-SM-EAZ54
50-59 years, male
65.1
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
64.8
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
64.1
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
63.8
GTEX-1LG7Y-2726-SM-D5OVW
50-59 years, male
63.7
GTEX-1HB9E-1826-SM-D4P33
50-59 years, male
62.4
GTEX-1HCU7-1826-SM-A9G2A
50-59 years, male
61.4
GTEX-1GF9W-1326-SM-7P8PX
60-69 years, male
61.3
GTEX-1OJC4-2326-SM-DTXA5
50-59 years, female
60.0
GTEX-13112-2126-SM-5GCO4
50-59 years, male
59.7
GTEX-1IKK5-0926-SM-A9G2U
60-69 years, male
58.9
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
58.2
GTEX-QDT8-1726-SM-EYYV6
30-39 years, female
56.5
GTEX-O5YV-1226-SM-EV795
60-69 years, female
55.5
GTEX-1A8FM-2026-SM-7P8RN
50-59 years, female
55.3
GTEX-REY6-1826-SM-EAZAT
60-69 years, male
55.1
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
55.0
GTEX-1GN1U-2126-SM-AHZ4J
50-59 years, female
55.0
GTEX-1H3NZ-2126-SM-9WPQ6
60-69 years, male
54.9
GTEX-1GMR3-2426-SM-7MXV2
40-49 years, male
54.8
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
54.5
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
53.4
GTEX-14C39-2126-SM-664OH
40-49 years, male
52.9
GTEX-S33H-1426-SM-EZ6L7
30-39 years, male
51.1
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
50.8
GTEX-1F48J-2226-SM-7MXTN
50-59 years, female
49.7
GTEX-1CB4J-1926-SM-7MGX8
60-69 years, male
49.6
GTEX-Y5V5-1226-SM-EYYVP
60-69 years, female
49.6
GTEX-1IL2V-1826-SM-ARU7R
70-79 years, male
48.6
GTEX-12696-0926-SM-5FQTV
60-69 years, male
48.3
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
47.4
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
46.6
GTEX-1HBPI-2026-SM-CE6RZ
50-59 years, male
46.6
GTEX-1H3VY-1926-SM-9JGHJ
50-59 years, male
45.0
GTEX-1N2EF-1426-SM-EXUSH
60-69 years, male
44.9
GTEX-1JMLX-1526-SM-AHZ3N
50-59 years, male
44.0
GTEX-1JJ6O-2526-SM-AHZ3J
60-69 years, male
43.9
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
43.6
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
43.1
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
42.9
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
42.6
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
42.4
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
42.3
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
41.7
GTEX-QLQW-1626-SM-CMKFE
30-39 years, male
40.1
GTEX-1MUQO-2526-SM-E9TJN
60-69 years, male
39.9
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
39.6
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
39.2
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
38.3
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
37.9
GTEX-1E2YA-1626-SM-7MGXS
50-59 years, male
36.8
GTEX-RN64-1626-SM-48FD7
50-59 years, male
35.0
GTEX-1I1GP-1926-SM-CNNQU
50-59 years, male
34.7
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
33.6
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Kidney - Medulla Average nTPM: 50.7
Samples: 4
Max nTPM: 69.5
Min nTPM: 40.7
Std nTPM: 11.1
Median nTPM: 46.3
GTEX-RU72-1926-SM-EAZ3F
50-59 years, female
69.5
GTEX-R55E-2026-SM-EZ6L1
20-29 years, male
47.1
GTEX-TKQ2-0626-SM-EZ6LB
50-59 years, male
45.5
GTEX-T5JC-1626-SM-EZ6KW
20-29 years, male
40.7
KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
