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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in red pulp:
Not detected
Cells in white pulp:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1.0
nTPM
HPA:
0.1
nTPM
GTEx:
1.0
nTPM
FANTOM5:
0.0
Scaled Tags Per Million
SPLEEN - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA041032
Cells in red pulp
Medium
Cells in white pulp
Not detected
SPLEEN - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPM
0.1
Female, age 60
Spleen sample 236 nTPM: 0
Cell types%
Lymphocytes:
40
Macrophages:
30
Endothelial cells:
15
Fibroblasts:
5
Other cell types:
10
Male, age 17
Spleen sample 237 nTPM: 0.3
Cell types%
Lymphocytes:
40
Macrophages:
35
Endothelial cells:
15
Fibroblasts:
5
Other cell types:
5
Male, age 20
Spleen sample 238 nTPM: 0.1
Cell types%
Lymphocytes:
40
Macrophages:
30
Endothelial cells:
15
Fibroblasts:
5
Other cell types:
10
Female, age 19
Spleen sample 239 nTPM: 0
Cell types%
Lymphocytes:
40
Macrophages:
30
Endothelial cells:
15
Fibroblasts:
10
Other cell types:
5
Female, age 65
Spleen sample 378 nTPM: 0
Cell types%
Lymphocytes:
35
Macrophages:
30
Endothelial cells:
20
Fibroblasts:
10
Other cell types:
5
SPLEEN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1.0
GTEx sample id
Sample description
nTPM
Spleen Average nTPM: 1.0
Samples: 241
Max nTPM: 3.2
Min nTPM: 0.1
Std nTPM: 0.5
Median nTPM: 0.9
GTEX-QESD-0126-SM-EXOHG
20-29 years, male
3.2
GTEX-111FC-1326-SM-5N9D9
60-69 years, male
2.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
2.7
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
2.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
2.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
2.3
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
2.2
GTEX-1MUQO-1326-SM-EV7AE
60-69 years, male
2.2
GTEX-ZPIC-0126-SM-DNZZ9
40-49 years, female
2.2
GTEX-18A67-1526-SM-7LG6F
50-59 years, male
2.1
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
2.1
GTEX-1PWST-1626-SM-EXOIU
70-79 years, male
2.1
GTEX-QLQW-0126-SM-447BK
30-39 years, male
2.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
2.0
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
2.0
GTEX-1H3O1-1126-SM-9WPO9
60-69 years, male
2.0
GTEX-1PIIG-1226-SM-EXOIQ
30-39 years, male
2.0
GTEX-NFK9-1426-SM-43ISG
40-49 years, male
2.0
GTEX-R55C-0126-SM-48FEQ
40-49 years, male
2.0
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
1.9
GTEX-15DYW-1426-SM-6LPIW
60-69 years, female
1.9
GTEX-X585-1826-SM-4QAS3
50-59 years, male
1.9
GTEX-1LNCM-0426-SM-DHXK6
50-59 years, female
1.9
GTEX-1MCC2-0826-SM-EV7AM
30-39 years, female
1.9
GTEX-1FIGZ-0126-SM-7MKGZ
40-49 years, male
1.8
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
1.8
GTEX-1KD5A-1526-SM-D4P3W
50-59 years, male
1.8
GTEX-1MJK3-0126-SM-DPRYY
20-29 years, male
1.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
1.7
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
1.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
1.7
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
1.7
GTEX-QDT8-1526-SM-EXOHP
30-39 years, female
1.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
1.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
1.6
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
1.6
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
1.6
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
1.6
GTEX-1F5PL-2226-SM-7MKHE
40-49 years, female
1.6
GTEX-1OFPY-0126-SM-EXOJ3
60-69 years, male
1.6
GTEX-1PPH7-0126-SM-E6CPB
40-49 years, male
1.6
GTEX-16MT8-1826-SM-7EWE8
60-69 years, female
1.5
GTEX-1AYD5-0226-SM-79ONV
50-59 years, male
1.5
GTEX-1C6VQ-2126-SM-7IGNL
50-59 years, male
1.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
1.5
GTEX-QCQG-0226-SM-48U28
50-59 years, female
1.5
GTEX-1F75I-0226-SM-7MKHQ
40-49 years, male
1.5
GTEX-1KAFJ-1026-SM-D4P2Z
50-59 years, male
1.5
GTEX-1N2EF-1526-SM-EXOIY
60-69 years, male
1.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
1.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
1.4
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
1.4
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
1.4
GTEX-WXYG-0126-SM-4OND7
50-59 years, female
1.4
GTEX-WY7C-0126-SM-4ONCO
50-59 years, male
1.4
GTEX-1HCU9-0126-SM-9WG7M
20-29 years, male
1.4
GTEX-1JKYR-1126-SM-CGQGJ
20-29 years, male
1.4
GTEX-1KANA-1226-SM-DHXKE
20-29 years, male
1.4
GTEX-1LSVX-1426-SM-DHXJO
60-69 years, male
1.4
GTEX-1QCLY-0126-SM-DPRZV
30-39 years, male
1.4
GTEX-1QMI2-1526-SM-EXOJT
60-69 years, male
1.4
GTEX-1R9K4-1526-SM-DPRY5
60-69 years, male
1.4
GTEX-Y5V5-1126-SM-EVYAR
60-69 years, female
1.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
1.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
1.3
GTEX-14ICL-0126-SM-664NG
30-39 years, male
1.3
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
1.3
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
1.3
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
1.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
1.3
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
1.3
GTEX-1J8QM-0926-SM-C1YQ9
60-69 years, female
1.3
GTEX-1LSNM-0126-SM-EAZ57
50-59 years, male
1.3
GTEX-1QAET-2326-SM-EXOJ1
50-59 years, male
1.3
GTEX-1QP29-0126-SM-EAZ3S
50-59 years, male
1.3
GTEX-1R9JW-0126-SM-EAZ4P
30-39 years, female
1.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
1.2
GTEX-15CHC-0726-SM-6AJ9D
60-69 years, female
1.2
GTEX-1B8KZ-0226-SM-7EWF6
50-59 years, male
1.2
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
1.2
GTEX-1QP66-0126-SM-EAZ3N
50-59 years, male
1.2
GTEX-1S831-0726-SM-EV79O
20-29 years, male
1.2
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
1.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
1.1
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
1.1
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
1.1
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
1.1
GTEX-14PJ4-0526-SM-6871G
60-69 years, male
1.1
GTEX-15DZA-0126-SM-6PAMV
30-39 years, female
1.1
GTEX-17F9E-1126-SM-79OMO
50-59 years, male
1.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
1.1
GTEX-PX3G-0926-SM-48U12
20-29 years, female
1.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
1.1
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
1.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
1.1
GTEX-17F98-0126-SM-7MGW3
40-49 years, female
1.1
GTEX-1GZ4H-0126-SM-9JGGI
50-59 years, female
1.1
GTEX-1HCU7-1426-SM-CNNQK
50-59 years, male
1.1
GTEX-1JMLX-1426-SM-CNNPO
50-59 years, male
1.1
GTEX-1LVAN-1026-SM-CNNQZ
50-59 years, female
1.1
GTEX-1MGNQ-1126-SM-EAZ4Y
40-49 years, male
1.1
GTEX-1R7EU-2026-SM-E9U63
60-69 years, male
1.1
GTEX-P78B-1226-SM-EZ6KP
40-49 years, female
1.1
GTEX-111CU-0426-SM-5GZY1
50-59 years, male
1.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
1.0
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
1.0
GTEX-15CHQ-1226-SM-6ETZL
60-69 years, male
1.0
GTEX-16MT9-1726-SM-6M47P
60-69 years, female
1.0
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
1.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
1.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
1.0
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
1.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
1.0
GTEX-ZTTD-1726-SM-57WEL
50-59 years, male
1.0
GTEX-1F5PK-0726-SM-7MGXN
50-59 years, male
1.0
GTEX-1R9PM-0126-SM-DPRY6
20-29 years, male
1.0
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
0.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
0.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
0.9
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
0.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
0.9
GTEX-14E1K-0126-SM-664NL
50-59 years, male
0.9
GTEX-14PN3-0226-SM-6871K
60-69 years, female
0.9
GTEX-15RIG-0126-SM-6PAN4
40-49 years, male
0.9
GTEX-1AX9K-0226-SM-793CM
50-59 years, male
0.9
GTEX-1C64O-1626-SM-731EN
60-69 years, male
0.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
0.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
0.9
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
0.9
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
0.9
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
0.9
GTEX-ZDYS-1026-SM-4WKHC
50-59 years, male
0.9
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
0.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
0.9
GTEX-1JMPZ-0926-SM-CXZJR
30-39 years, male
0.9
GTEX-1PDJ9-0226-SM-DPRYX
20-29 years, male
0.9
GTEX-1RMOY-0726-SM-EV79D
50-59 years, male
0.9
GTEX-QMRM-0226-SM-CL55S
50-59 years, male
0.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
0.8
GTEX-15RIF-0526-SM-6LLI2
20-29 years, male
0.8
GTEX-18A66-1826-SM-7KFSU
60-69 years, male
0.8
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
0.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
0.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
0.8
GTEX-1JK1U-0126-SM-C1YQY
60-69 years, male
0.8
GTEX-1LG7Z-0126-SM-EV79V
30-39 years, male
0.8
GTEX-1QP2A-2526-SM-EXOJB
50-59 years, male
0.8
GTEX-1QW4Y-0126-SM-DPRZQ
30-39 years, male
0.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
0.7
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
0.7
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
0.7
GTEX-14PKU-0526-SM-6871A
40-49 years, female
0.7
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
0.7
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
0.7
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
0.7
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
0.7
GTEX-ZF29-0626-SM-4WKHD
60-69 years, female
0.7
GTEX-ZF2S-0326-SM-4WKGD
50-59 years, female
0.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
0.7
GTEX-1C475-1126-SM-7MGY7
40-49 years, female
0.7
GTEX-1JMQK-1126-SM-CXZJW
60-69 years, male
0.7
GTEX-1L5NE-0926-SM-D4P3P
50-59 years, male
0.7
GTEX-1RAZQ-0126-SM-EV7B1
30-39 years, male
0.7
GTEX-1RAZR-1626-SM-EAZ4V
40-49 years, male
0.7
GTEX-1RNTQ-1026-SM-EV7B4
20-29 years, female
0.7
GTEX-OIZF-0926-SM-7MKH7
60-69 years, male
0.7
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
0.6
GTEX-13OVK-0426-SM-7KFT8
40-49 years, male
0.6
GTEX-15RJ7-0126-SM-6LPJN
40-49 years, male
0.6
GTEX-17GQL-0126-SM-72D5Q
60-69 years, male
0.6
GTEX-1CB4F-0226-SM-7EPHS
60-69 years, male
0.6
GTEX-1IDJE-0126-SM-C1YQ6
50-59 years, female
0.6
GTEX-1J8Q3-0126-SM-C1YSI
60-69 years, male
0.6
GTEX-1LGRB-0126-SM-CNNR6
50-59 years, female
0.6
GTEX-1R9K5-1126-SM-EAZ4G
50-59 years, male
0.6
GTEX-P4PQ-0926-SM-E9U4D
60-69 years, male
0.6
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
0.5
GTEX-12WSD-1726-SM-5GCN4
60-69 years, female
0.5
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
0.5
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
0.5
GTEX-15ETS-3126-SM-6LPKN
40-49 years, female
0.5
GTEX-15UF7-1926-SM-6LPJT
40-49 years, male
0.5
GTEX-169BO-0126-SM-79OLS
50-59 years, male
0.5
GTEX-1A3MV-0126-SM-731FQ
30-39 years, male
0.5
GTEX-1AMFI-0926-SM-731E4
50-59 years, female
0.5
GTEX-1B97I-0126-SM-731DH
40-49 years, male
0.5
GTEX-1CB4E-0126-SM-7DHMX
60-69 years, male
0.5
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
0.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
0.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
0.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
0.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
0.5
GTEX-1QCLZ-1026-SM-E6CR1
60-69 years, female
0.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
0.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
0.4
GTEX-14JG6-0226-SM-6872A
30-39 years, female
0.4
GTEX-14PJ5-0326-SM-664OD
60-69 years, female
0.4
GTEX-14PK6-0526-SM-69LOF
70-79 years, female
0.4
GTEX-15ER7-1526-SM-6LLHO
20-29 years, female
0.4
GTEX-15F5U-0126-SM-6LPKA
40-49 years, male
0.4
GTEX-15SB6-0126-SM-6LPJR
50-59 years, female
0.4
GTEX-15SDE-0126-SM-793BA
50-59 years, female
0.4
GTEX-1B97J-1926-SM-7IGQB
50-59 years, female
0.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
0.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
0.4
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
0.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
0.4
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
0.4
GTEX-WYJK-0726-SM-4ONC9
50-59 years, male
0.4
GTEX-1GF9U-0126-SM-AHZ4G
40-49 years, female
0.4
GTEX-1H3VY-1526-SM-9WG7S
50-59 years, male
0.4
GTEX-1HSMQ-0126-SM-D4P2I
50-59 years, male
0.4
GTEX-1K9T9-0626-SM-CXZKY
50-59 years, female
0.4
GTEX-ZG7Y-2026-SM-DO91N
50-59 years, male
0.4
GTEX-ZPCL-0626-SM-DNZZ6
60-69 years, female
0.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
0.3
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
0.3
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
0.3
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
0.3
GTEX-14PJ6-0226-SM-6AJ9K
60-69 years, female
0.3
GTEX-15SHV-0126-SM-6LPIS
60-69 years, male
0.3
GTEX-17F96-1426-SM-7IGQA
70-79 years, male
0.3
GTEX-17HHE-0326-SM-793BH
50-59 years, male
0.3
GTEX-1C4CL-0626-SM-731DM
30-39 years, male
0.3
GTEX-WYVS-0126-SM-4ONDH
40-49 years, female
0.3
GTEX-ZEX8-0726-SM-4WKH8
50-59 years, male
0.3
GTEX-1JKYN-0326-SM-AHZ4D
30-39 years, male
0.3
GTEX-1MCYP-0226-SM-EV7A3
20-29 years, female
0.3
GTEX-1R7EV-0126-SM-EAZ3O
40-49 years, male
0.3
GTEX-1RAZA-1026-SM-E6CQ9
20-29 years, male
0.3
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
0.2
GTEX-14BMU-0426-SM-73KYT
20-29 years, female
0.2
GTEX-16XZY-0126-SM-7IGQ9
70-79 years, male
0.2
GTEX-17F97-1626-SM-72D6W
50-59 years, male
0.2
GTEX-1CB4I-1426-SM-79OLZ
50-59 years, male
0.2
GTEX-1IDJC-0126-SM-C1YQC
50-59 years, male
0.2
GTEX-P4QT-0926-SM-EZ6KQ
50-59 years, female
0.2
GTEX-QV44-0126-SM-CJI1X
50-59 years, male
0.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
0.1
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
0.1
GTEX-1K2DA-0126-SM-CGQGV
50-59 years, male
0.1
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SPLEEN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
