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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Squamous epithelial cells:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
21.3
nTPM
GTEx:
21.3
nTPM
FANTOM5:
109.8
Scaled Tags Per Million
VAGINA - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA018911
Antibody CAB025581
Squamous epithelial cells
Not detected
Medium
VAGINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
21.3
GTEx sample id
Sample description
nTPM
Vagina Average nTPM: 21.3
Samples: 156
Max nTPM: 36.4
Min nTPM: 9.9
Std nTPM: 4.2
Median nTPM: 21.3
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
36.4
GTEX-14JG6-0726-SM-69LQH
30-39 years, female
33.3
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
31.4
GTEX-11I78-2026-SM-5987C
50-59 years, female
30.6
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
30.1
GTEX-1IDJU-1026-SM-AHZ2U
60-69 years, female
29.0
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
28.6
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
28.3
GTEX-1F5PL-1826-SM-7P8PP
40-49 years, female
28.3
GTEX-1MCC2-1126-SM-EVYD6
30-39 years, female
27.8
GTEX-1GF9U-1926-SM-7P8TZ
40-49 years, female
27.6
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
27.5
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
27.4
GTEX-17F9Y-2326-SM-7DUFP
70-79 years, female
27.4
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
27.3
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
27.3
GTEX-1C475-0526-SM-793AC
40-49 years, female
27.1
GTEX-1MCYP-1326-SM-EV7AD
20-29 years, female
27.1
GTEX-1LGOU-1126-SM-D3LAI
20-29 years, female
26.8
GTEX-14PKU-1326-SM-6871B
40-49 years, female
26.5
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
26.5
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
26.0
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
26.0
GTEX-14PN3-1626-SM-6AJAV
60-69 years, female
25.7
GTEX-14H4A-2426-SM-664OQ
40-49 years, female
25.5
GTEX-15SB6-1426-SM-7KUEM
50-59 years, female
25.5
GTEX-1LNCM-1026-SM-E9U5D
50-59 years, female
25.5
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
25.2
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
25.2
GTEX-1LH75-1726-SM-DHXKZ
50-59 years, female
25.2
GTEX-S341-1226-SM-4AD5S
40-49 years, female
24.9
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
24.7
GTEX-1GN1W-1526-SM-7P8TG
50-59 years, female
24.7
GTEX-1HBPM-2726-SM-9WYUA
60-69 years, female
24.5
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
24.4
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
24.3
GTEX-1I1GT-1226-SM-B2LVK
60-69 years, female
24.3
GTEX-1J1OQ-1826-SM-CL53R
40-49 years, female
24.3
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
24.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
24.0
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
23.8
GTEX-1JMQL-2326-SM-CNNPV
50-59 years, female
23.7
GTEX-1S5ZU-2626-SM-E9TII
20-29 years, female
23.7
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
23.6
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
23.6
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
23.2
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
23.1
GTEX-16NPV-2526-SM-6M483
50-59 years, female
23.0
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
23.0
GTEX-1HCU6-2326-SM-ACKXP
60-69 years, female
23.0
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
22.7
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
22.6
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
22.6
GTEX-1LVAN-1626-SM-CNPQ7
50-59 years, female
22.6
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
22.5
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
22.5
GTEX-1IE54-2626-SM-CMKFY
40-49 years, female
22.5
GTEX-15SDE-1726-SM-6LPJS
50-59 years, female
22.4
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
22.2
GTEX-1GN1U-2426-SM-9KNTU
50-59 years, female
22.1
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
22.0
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
22.0
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
22.0
GTEX-1JN76-1526-SM-CNPPF
20-29 years, female
21.9
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
21.8
GTEX-16NGA-1626-SM-72D6M
40-49 years, female
21.8
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
21.7
GTEX-1HCU8-2026-SM-9YFLE
60-69 years, female
21.7
GTEX-18A7A-2826-SM-7LT8J
50-59 years, female
21.6
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
21.6
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
21.6
GTEX-1LVAM-1926-SM-E6CIM
50-59 years, female
21.6
GTEX-15UF6-2126-SM-6M46Z
70-79 years, female
21.5
GTEX-1CAMS-2326-SM-793CR
40-49 years, female
21.5
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
21.5
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
21.5
GTEX-1PIEJ-1926-SM-EVYB7
20-29 years, female
21.4
GTEX-WYVS-1426-SM-4ONCV
40-49 years, female
21.3
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
21.3
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
20.9
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
20.6
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
20.6
GTEX-1R9JW-1426-SM-DTX9K
30-39 years, female
20.6
GTEX-ZAK1-2426-SM-EXOHM
50-59 years, female
20.6
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
20.5
GTEX-1GMR8-2526-SM-7RHI9
50-59 years, female
20.5
GTEX-XUZC-1226-SM-4BRVJ
30-39 years, female
20.4
GTEX-1ICG6-1626-SM-ARL81
70-79 years, female
20.3
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
20.2
GTEX-15DYW-2926-SM-6PANA
60-69 years, female
20.0
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
20.0
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
20.0
GTEX-1HBPH-2926-SM-9WPNX
40-49 years, female
20.0
GTEX-1LGRB-2126-SM-COH48
50-59 years, female
20.0
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
19.9
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
19.8
GTEX-183WM-2126-SM-7LG4I
70-79 years, female
19.8
GTEX-QVJO-2526-SM-CYPRA
60-69 years, female
19.8
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
19.4
GTEX-Q734-1426-SM-DTXFX
40-49 years, female
19.4
GTEX-1HFI7-1126-SM-A96S5
50-59 years, female
19.3
GTEX-1QP28-1426-SM-EVR4E
50-59 years, female
19.3
GTEX-1F48J-2526-SM-7P8TU
50-59 years, female
19.1
GTEX-145LS-2526-SM-5TDC9
60-69 years, female
19.0
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
19.0
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
19.0
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
18.9
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
18.9
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
18.9
GTEX-1QPFJ-1626-SM-DTX7X
30-39 years, female
18.9
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
18.8
GTEX-1I4MK-1726-SM-ARL7O
50-59 years, female
18.7
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
18.6
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
18.6
GTEX-1J8EW-2526-SM-CKZO2
60-69 years, female
18.6
GTEX-14PJ6-1626-SM-6872D
60-69 years, female
18.3
GTEX-17JCI-2526-SM-7DHLB
60-69 years, female
18.3
GTEX-18D9A-1026-SM-7KFRU
30-39 years, female
18.3
GTEX-1HCUA-1026-SM-A9SMI
50-59 years, female
18.3
GTEX-14PJM-2926-SM-69LOE
50-59 years, female
18.2
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
18.1
GTEX-15ER7-2526-SM-7KUFW
20-29 years, female
17.9
GTEX-1JN1M-2326-SM-ARZNG
60-69 years, female
17.9
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
17.7
GTEX-15SHU-2926-SM-7KUKT
40-49 years, female
17.6
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
17.5
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
17.4
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
17.3
GTEX-1A8FM-2426-SM-7IGPE
50-59 years, female
17.3
GTEX-1NUQO-1826-SM-E6CQU
20-29 years, female
17.3
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
17.2
GTEX-OHPN-2426-SM-E9TI5
60-69 years, female
17.0
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
16.8
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
16.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
16.7
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
16.7
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
16.4
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
16.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
16.3
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
16.3
GTEX-1EWIQ-2326-SM-7IGNF
70-79 years, female
16.2
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
16.1
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
16.1
GTEX-NPJ7-2526-SM-EV79A
60-69 years, female
16.1
GTEX-QCQG-1226-SM-48U23
50-59 years, female
15.9
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
15.9
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
15.8
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
15.8
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
15.3
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
15.1
GTEX-1QCLZ-2226-SM-DTX7R
60-69 years, female
15.1
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
14.5
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
14.4
GTEX-SN8G-2626-SM-EXUQT
50-59 years, female
13.2
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
10.2
GTEX-1AMFI-1526-SM-73KVY
50-59 years, female
9.9
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VAGINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.