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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Squamous epithelial cells:
Low
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
239.0
nTPM
GTEx:
239.0
nTPM
FANTOM5:
222.4
Scaled Tags Per Million
VAGINA - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody CAB020825
Antibody CAB040557
Squamous epithelial cells
Low
Medium
VAGINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
239.0
GTEx sample id
Sample description
nTPM
Vagina Average nTPM: 239.0
Samples: 156
Max nTPM: 576.5
Min nTPM: 147.9
Std nTPM: 56.8
Median nTPM: 228.6
GTEX-1AMFI-1526-SM-73KVY
50-59 years, female
576.5
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
469.1
GTEX-1JMQL-2326-SM-CNNPV
50-59 years, female
440.1
GTEX-14JG6-0726-SM-69LQH
30-39 years, female
427.6
GTEX-1F5PL-1826-SM-7P8PP
40-49 years, female
344.9
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
339.6
GTEX-1HBPM-2726-SM-9WYUA
60-69 years, female
339.1
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
330.1
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
329.0
GTEX-1LVAM-1926-SM-E6CIM
50-59 years, female
327.2
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
320.0
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
316.1
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
314.1
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
311.1
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
307.1
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
303.9
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
303.4
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
298.4
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
297.3
GTEX-1JN76-1526-SM-CNPPF
20-29 years, female
295.5
GTEX-1A8FM-2426-SM-7IGPE
50-59 years, female
294.4
GTEX-1S5ZU-2626-SM-E9TII
20-29 years, female
292.2
GTEX-QVJO-2526-SM-CYPRA
60-69 years, female
288.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
285.1
GTEX-14PJ6-1626-SM-6872D
60-69 years, female
284.4
GTEX-QCQG-1226-SM-48U23
50-59 years, female
281.8
GTEX-14H4A-2426-SM-664OQ
40-49 years, female
281.4
GTEX-1NUQO-1826-SM-E6CQU
20-29 years, female
274.0
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
273.3
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
273.1
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
268.0
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
261.9
GTEX-Q734-1426-SM-DTXFX
40-49 years, female
260.0
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
259.5
GTEX-18A7A-2826-SM-7LT8J
50-59 years, female
259.3
GTEX-15ER7-2526-SM-7KUFW
20-29 years, female
258.6
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
257.2
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
256.5
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
254.7
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
253.5
GTEX-1QP28-1426-SM-EVR4E
50-59 years, female
252.9
GTEX-1MCYP-1326-SM-EV7AD
20-29 years, female
252.1
GTEX-18D9A-1026-SM-7KFRU
30-39 years, female
251.8
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
250.9
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
250.3
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
249.0
GTEX-1GMR8-2526-SM-7RHI9
50-59 years, female
245.5
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
243.8
GTEX-1IDJU-1026-SM-AHZ2U
60-69 years, female
243.8
GTEX-1LNCM-1026-SM-E9U5D
50-59 years, female
243.7
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
243.3
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
242.3
GTEX-1I4MK-1726-SM-ARL7O
50-59 years, female
242.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
241.3
GTEX-14PKU-1326-SM-6871B
40-49 years, female
241.0
GTEX-1J1OQ-1826-SM-CL53R
40-49 years, female
240.5
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
240.3
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
238.8
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
237.4
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
236.6
GTEX-14PN3-1626-SM-6AJAV
60-69 years, female
236.4
GTEX-183WM-2126-SM-7LG4I
70-79 years, female
236.0
GTEX-1J8EW-2526-SM-CKZO2
60-69 years, female
236.0
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
234.6
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
234.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
234.1
GTEX-1GN1W-1526-SM-7P8TG
50-59 years, female
234.0
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
233.6
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
232.8
GTEX-1LGRB-2126-SM-COH48
50-59 years, female
232.5
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
231.2
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
231.1
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
230.8
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
230.7
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
230.4
GTEX-16NGA-1626-SM-72D6M
40-49 years, female
229.1
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
228.7
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
228.7
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
228.5
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
226.8
GTEX-XUZC-1226-SM-4BRVJ
30-39 years, female
226.5
GTEX-16NPV-2526-SM-6M483
50-59 years, female
226.3
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
226.2
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
226.1
GTEX-SN8G-2626-SM-EXUQT
50-59 years, female
225.9
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
225.6
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
225.0
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
224.5
GTEX-15SDE-1726-SM-6LPJS
50-59 years, female
224.3
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
223.5
GTEX-1F48J-2526-SM-7P8TU
50-59 years, female
223.5
GTEX-1ICG6-1626-SM-ARL81
70-79 years, female
223.3
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
223.0
GTEX-1LVAN-1626-SM-CNPQ7
50-59 years, female
221.4
GTEX-17F9Y-2326-SM-7DUFP
70-79 years, female
220.9
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
219.2
GTEX-1HCU8-2026-SM-9YFLE
60-69 years, female
219.2
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
219.1
GTEX-ZAK1-2426-SM-EXOHM
50-59 years, female
219.0
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
218.5
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
218.1
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
217.3
GTEX-15SHU-2926-SM-7KUKT
40-49 years, female
217.2
GTEX-1HCUA-1026-SM-A9SMI
50-59 years, female
216.9
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
214.8
GTEX-1CAMS-2326-SM-793CR
40-49 years, female
213.5
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
213.1
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
212.7
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
211.1
GTEX-11I78-2026-SM-5987C
50-59 years, female
210.3
GTEX-1QPFJ-1626-SM-DTX7X
30-39 years, female
209.3
GTEX-145LS-2526-SM-5TDC9
60-69 years, female
209.0
GTEX-1LH75-1726-SM-DHXKZ
50-59 years, female
208.3
GTEX-1R9JW-1426-SM-DTX9K
30-39 years, female
208.0
GTEX-1C475-0526-SM-793AC
40-49 years, female
207.3
GTEX-1MCC2-1126-SM-EVYD6
30-39 years, female
206.4
GTEX-OHPN-2426-SM-E9TI5
60-69 years, female
205.8
GTEX-WYVS-1426-SM-4ONCV
40-49 years, female
205.7
GTEX-1IE54-2626-SM-CMKFY
40-49 years, female
204.8
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
203.7
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
203.2
GTEX-15UF6-2126-SM-6M46Z
70-79 years, female
202.6
GTEX-15SB6-1426-SM-7KUEM
50-59 years, female
202.2
GTEX-S341-1226-SM-4AD5S
40-49 years, female
202.1
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
201.0
GTEX-15DYW-2926-SM-6PANA
60-69 years, female
199.8
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
199.8
GTEX-NPJ7-2526-SM-EV79A
60-69 years, female
199.8
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
199.3
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
198.1
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
197.4
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
196.0
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
194.6
GTEX-1HFI7-1126-SM-A96S5
50-59 years, female
194.1
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
193.4
GTEX-1GN1U-2426-SM-9KNTU
50-59 years, female
192.4
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
192.2
GTEX-1GF9U-1926-SM-7P8TZ
40-49 years, female
191.1
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
188.0
GTEX-1HBPH-2926-SM-9WPNX
40-49 years, female
185.6
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
184.4
GTEX-1PIEJ-1926-SM-EVYB7
20-29 years, female
182.9
GTEX-1EWIQ-2326-SM-7IGNF
70-79 years, female
178.0
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
177.4
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
177.0
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
174.4
GTEX-17JCI-2526-SM-7DHLB
60-69 years, female
173.7
GTEX-1QCLZ-2226-SM-DTX7R
60-69 years, female
173.7
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
173.0
GTEX-14PJM-2926-SM-69LOE
50-59 years, female
171.8
GTEX-1I1GT-1226-SM-B2LVK
60-69 years, female
168.2
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
168.0
GTEX-1JN1M-2326-SM-ARZNG
60-69 years, female
167.3
GTEX-1LGOU-1126-SM-D3LAI
20-29 years, female
167.0
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
157.3
GTEX-1HCU6-2326-SM-ACKXP
60-69 years, female
147.9
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VAGINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.