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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
189.9
nTPM
Monaco:
636.0
nTPM
Schmiedel:
17.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
189.9
HPA sample
nTPM
gdT-cell nTPM: 189.9
Samples: 6
Max nTPM: 232.5
Min nTPM: 130.3
P10809_1007
130.3
P10809_1022
227.2
P10809_1041
232.5
P10809_1060
200.0
P10809_1077
170.4
P10809_1098
179.2
MAIT T-cell nTPM: 11.3
Samples: 6
Max nTPM: 22.2
Min nTPM: 6.4
P10809_1006
8.0
P10809_1024
6.4
P10809_1043
11.2
P10809_1062
9.2
P10809_1083
10.9
P10809_1097
22.2
Memory CD4 T-cell nTPM: 15.8
Samples: 6
Max nTPM: 46.5
Min nTPM: 0.6
P10809_1014
0.6
P10809_1026
1.0
P10809_1045
6.7
P10809_1064
38.5
P10809_1086
46.5
P10809_1113
1.6
Memory CD8 T-cell nTPM: 89.1
Samples: 5
Max nTPM: 116.9
Min nTPM: 34.3
P10809_1012
34.3
P10809_1027
116.9
P10809_1046
101.7
P10809_1065
112.1
P10809_1111
80.5
Naive CD4 T-cell nTPM: 8.0
Samples: 6
Max nTPM: 37.9
Min nTPM: 1.0
P10809_1015
1.4
P10809_1030
1.0
P10809_1049
3.1
P10809_1068
3.4
P10809_1085
37.9
P10809_1112
1.1
Naive CD8 T-cell nTPM: 78.6
Samples: 6
Max nTPM: 150.5
Min nTPM: 11.2
P10809_1016
11.2
P10809_1031
56.9
P10809_1050
97.4
P10809_1069
121.0
P10809_1087
150.5
P10809_1110
34.4
T-reg nTPM: 1.3
Samples: 6
Max nTPM: 3.0
Min nTPM: 0.1
P10809_1018
3.0
P10809_1037
0.2
P10809_1056
0.1
P10809_1075
0.7
P10809_1094
3.0
P10809_1106
0.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
636.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 18.3
Samples: 4
Max nTPM: 29.5
Min nTPM: 6.1
RHH5202_R3573
6.1
RHH5230_R3602
9.3
RHH5259_R3631
28.3
RHH5288_R3660
29.5
Effector memory CD8 T-cell nTPM: 321.9
Samples: 4
Max nTPM: 373.5
Min nTPM: 247.9
RHH5203_R3574
247.9
RHH5231_R3603
373.5
RHH5260_R3632
340.9
RHH5289_R3661
325.2
MAIT T-cell nTPM: 41.5
Samples: 4
Max nTPM: 55.5
Min nTPM: 24.4
RHH5233_R3605
31.3
RHH5205_R3576
24.4
RHH5262_R3634
54.6
RHH5297_R3663
55.5
Memory CD4 T-cell TFH nTPM: 6.2
Samples: 4
Max nTPM: 7.4
Min nTPM: 4.3
RHH5300_R3666
4.3
RHH5236_R3608
6.5
RHH5265_R3637
6.7
RHH5208_R3579
7.4
Memory CD4 T-cell Th1 nTPM: 11.1
Samples: 4
Max nTPM: 14.6
Min nTPM: 2.4
RHH5210_R3581
14.0
RHH5302_R3668
2.4
RHH5238_R3610
14.6
RHH5267_R3639
13.4
Memory CD4 T-cell Th1/Th17 nTPM: 8.5
Samples: 4
Max nTPM: 12.8
Min nTPM: 6.2
RHH5303_R3669
6.2
RHH5211_R3582
12.8
RHH5239_R3611
6.3
RHH5268_R3640
8.7
Memory CD4 T-cell Th17 nTPM: 5.8
Samples: 4
Max nTPM: 7.3
Min nTPM: 4.8
RHH5304_R3670
5.9
RHH5212_R3583
7.3
RHH5240_R3612
4.8
RHH5269_R3641
5.0
Memory CD4 T-cell Th2 nTPM: 6.0
Samples: 4
Max nTPM: 11.9
Min nTPM: 1.1
RHH5305_R3671
4.4
RHH5213_R3584
11.9
RHH5241_R3613
1.1
RHH5270_R3642
6.7
Naive CD4 T-cell nTPM: 10.6
Samples: 4
Max nTPM: 15.5
Min nTPM: 5.1
RHH5306_R3672
5.1
RHH5214_R3585
15.5
RHH5242_R3614
13.4
RHH5271_R3643
8.2
Naive CD8 T-cell nTPM: 2.7
Samples: 4
Max nTPM: 5.1
Min nTPM: 0.2
RHH5201_R3572
0.2
RHH5229_R3601
5.1
RHH5258_R3630
4.9
RHH5287_R3659
0.6
Non-Vd2 gdTCR nTPM: 636.0
Samples: 4
Max nTPM: 714.6
Min nTPM: 565.3
RHH5235_R3607
565.3
RHH5264_R3636
664.3
RHH5207_R3578
714.6
RHH5299_R3665
599.8
T-reg nTPM: 4.6
Samples: 4
Max nTPM: 11.0
Min nTPM: 1.3
RHH5301_R3667
1.3
RHH5237_R3609
4.2
RHH5266_R3638
1.9
RHH5209_R3580
11.0
Terminal effector memory CD4 T-cell nTPM: 408.9
Samples: 2
Max nTPM: 495.8
Min nTPM: 321.9
RHH5243_R3615
495.8
RHH5272_R3644
321.9
Terminal effector memory CD8 T-cell nTPM: 539.2
Samples: 4
Max nTPM: 566.2
Min nTPM: 499.5
RHH5232_R3604
556.0
RHH5204_R3575
535.0
RHH5261_R3633
566.2
RHH5296_R3662
499.5
Vd2 gdTCR nTPM: 353.9
Samples: 4
Max nTPM: 507.7
Min nTPM: 243.4
RHH5234_R3606
243.4
RHH5206_R3577
507.7
RHH5263_R3635
362.9
RHH5298_R3664
301.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
