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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
131.9
nTPM
Monaco:
118.7
nTPM
Schmiedel:
28.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.9
HPA sample
nTPM
gdT-cell nTPM: 71.4
Samples: 6
Max nTPM: 90.7
Min nTPM: 61.0
P10809_1007
61.3
P10809_1022
90.7
P10809_1041
72.6
P10809_1060
71.1
P10809_1077
61.0
P10809_1098
71.9
MAIT T-cell nTPM: 66.7
Samples: 6
Max nTPM: 78.9
Min nTPM: 56.0
P10809_1006
56.0
P10809_1024
76.9
P10809_1043
68.7
P10809_1062
60.4
P10809_1083
59.3
P10809_1097
78.9
Memory CD4 T-cell nTPM: 69.4
Samples: 6
Max nTPM: 85.3
Min nTPM: 62.2
P10809_1014
62.2
P10809_1026
62.3
P10809_1045
85.3
P10809_1064
67.1
P10809_1086
69.3
P10809_1113
70.3
Memory CD8 T-cell nTPM: 72.3
Samples: 5
Max nTPM: 94.3
Min nTPM: 59.4
P10809_1012
66.6
P10809_1027
79.9
P10809_1046
94.3
P10809_1065
59.4
P10809_1111
61.5
Naive CD4 T-cell nTPM: 92.3
Samples: 6
Max nTPM: 115.7
Min nTPM: 71.5
P10809_1015
71.5
P10809_1030
92.7
P10809_1049
115.7
P10809_1068
92.2
P10809_1085
83.5
P10809_1112
98.2
Naive CD8 T-cell nTPM: 66.2
Samples: 6
Max nTPM: 79.2
Min nTPM: 56.6
P10809_1016
65.6
P10809_1031
62.3
P10809_1050
74.5
P10809_1069
59.0
P10809_1087
56.6
P10809_1110
79.2
T-reg nTPM: 131.9
Samples: 6
Max nTPM: 163.7
Min nTPM: 109.9
P10809_1018
117.0
P10809_1037
109.9
P10809_1056
163.7
P10809_1075
115.8
P10809_1094
143.0
P10809_1106
141.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 66.8
Samples: 4
Max nTPM: 85.9
Min nTPM: 53.7
RHH5202_R3573
85.9
RHH5230_R3602
53.7
RHH5259_R3631
57.7
RHH5288_R3660
69.7
Effector memory CD8 T-cell nTPM: 93.8
Samples: 4
Max nTPM: 106.7
Min nTPM: 78.8
RHH5203_R3574
106.7
RHH5231_R3603
95.1
RHH5260_R3632
78.8
RHH5289_R3661
94.6
MAIT T-cell nTPM: 81.7
Samples: 4
Max nTPM: 106.1
Min nTPM: 70.3
RHH5233_R3605
70.3
RHH5205_R3576
77.1
RHH5262_R3634
73.4
RHH5297_R3663
106.1
Memory CD4 T-cell TFH nTPM: 117.2
Samples: 4
Max nTPM: 126.2
Min nTPM: 108.0
RHH5300_R3666
126.2
RHH5236_R3608
116.1
RHH5265_R3637
108.0
RHH5208_R3579
118.6
Memory CD4 T-cell Th1 nTPM: 79.2
Samples: 4
Max nTPM: 101.8
Min nTPM: 57.1
RHH5210_R3581
101.8
RHH5302_R3668
93.7
RHH5238_R3610
57.1
RHH5267_R3639
64.3
Memory CD4 T-cell Th1/Th17 nTPM: 75.1
Samples: 4
Max nTPM: 109.3
Min nTPM: 38.5
RHH5303_R3669
109.3
RHH5211_R3582
100.4
RHH5239_R3611
38.5
RHH5268_R3640
52.2
Memory CD4 T-cell Th17 nTPM: 69.6
Samples: 4
Max nTPM: 97.6
Min nTPM: 53.7
RHH5304_R3670
70.8
RHH5212_R3583
97.6
RHH5240_R3612
53.7
RHH5269_R3641
56.4
Memory CD4 T-cell Th2 nTPM: 78.1
Samples: 4
Max nTPM: 87.0
Min nTPM: 71.6
RHH5305_R3671
87.0
RHH5213_R3584
75.6
RHH5241_R3613
78.3
RHH5270_R3642
71.6
Naive CD4 T-cell nTPM: 103.7
Samples: 4
Max nTPM: 123.1
Min nTPM: 70.2
RHH5306_R3672
123.1
RHH5214_R3585
118.3
RHH5242_R3614
103.0
RHH5271_R3643
70.2
Naive CD8 T-cell nTPM: 86.2
Samples: 4
Max nTPM: 112.9
Min nTPM: 40.6
RHH5201_R3572
112.9
RHH5229_R3601
40.6
RHH5258_R3630
100.7
RHH5287_R3659
90.6
Non-Vd2 gdTCR nTPM: 87.7
Samples: 4
Max nTPM: 104.2
Min nTPM: 55.5
RHH5235_R3607
55.5
RHH5264_R3636
97.0
RHH5207_R3578
104.2
RHH5299_R3665
94.1
T-reg nTPM: 118.7
Samples: 4
Max nTPM: 157.0
Min nTPM: 94.2
RHH5301_R3667
157.0
RHH5237_R3609
113.9
RHH5266_R3638
94.2
RHH5209_R3580
109.7
Terminal effector memory CD4 T-cell nTPM: 86.3
Samples: 2
Max nTPM: 121.1
Min nTPM: 51.4
RHH5243_R3615
51.4
RHH5272_R3644
121.1
Terminal effector memory CD8 T-cell nTPM: 81.1
Samples: 4
Max nTPM: 97.6
Min nTPM: 62.3
RHH5232_R3604
79.1
RHH5204_R3575
97.6
RHH5261_R3633
62.3
RHH5296_R3662
85.4
Vd2 gdTCR nTPM: 81.7
Samples: 4
Max nTPM: 90.9
Min nTPM: 64.5
RHH5234_R3606
87.6
RHH5206_R3577
90.9
RHH5263_R3635
64.5
RHH5298_R3664
83.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
