HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:34.1 nTPM
HPA Brain:81.8 nTPM
GTEx:34.1 nTPM
FANTOM5:104.0 Scaled Tags Per Million
Pig:68.6 nTPM
Mouse:93.4 nTPM
Allen mouse:11.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012072Antibody CAB022049
Glial cells LowNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.8
Sample id Sample description nTPM
Hippocampus
nTPM: 77.5
2529 Female, age 94, left hemisphere 83.1
2621 Female, age 67, right hemisphere 81.7
2148 Female, age 91, left hemisphere 80.5
1855 Male, age 76, left hemisphere 75.5
1898 Male, age 80, left hemisphere 74.6
1911 Female, age 85, right hemisphere 69.7
Dentate gyrus
nTPM: 74.9
2531 Female, age 67, both hemispheres 82.6
1927 Female, age 91, both hemispheres 76.3
2246 Female, age 85, both hemispheres 74.8
2528 Male, age 74, both hemispheres 74.7
2530 Female, age 94, left hemisphere 74.0
2010 Male, age 76, both hemispheres 67.0
Entorhinal gyrus
nTPM: 80.2
2686 Male, age 75, right hemisphere 89.0
2613 Female, age 94, left hemisphere 84.9
1787 Male, age 76, left hemisphere 81.3
1938 Female, age 85, left hemisphere 78.8
2117 Female, age 91, right hemisphere 74.0
2764 Male, age 80, right hemisphere 73.4
Hippocampus, CA1
nTPM: 71.6
2045 Male, age 76, both hemispheres 78.3
2082 Female, age 91, right hemisphere 72.2
1873 Female, age 85, both hemispheres 70.7
2527 Male, age 74, both hemispheres 69.0
2749 Male, age 80, left hemisphere 67.8
Hippocampus, CA2
nTPM: 70.7
1892 Male, age 76, both hemispheres 79.5
2437 Female, age 94, left hemisphere 76.4
1940 Female, age 85, left hemisphere 73.5
2113 Female, age 91, right hemisphere 71.7
1963 Male, age 80, left hemisphere 66.7
2249 Male, age 74, both hemispheres 56.6
Hippocampus, CA3
nTPM: 80.3
2861 Female, age 67, both hemispheres 107.8
2620 Female, age 94, left hemisphere 91.8
1867 Male, age 76, both hemispheres 77.5
2137 Male, age 80, left hemisphere 74.0
2436 Male, age 74, both hemispheres 65.6
1891 Female, age 85, both hemispheres 65.4
Parahippocampal cortex
nTPM: 76.5
2622 Female, age 67, right hemisphere 90.3
1850 Male, age 80, both hemispheres 80.0
1933 Female, age 85, both hemispheres 78.5
2245 Female, age 91, both hemispheres 77.6
2693 Female, age 94, both hemispheres 75.5
2692 Male, age 74, both hemispheres 75.3
2250 Female, age 67, right hemisphere 74.9
2532 Female, age 72, left hemisphere 74.9
1990 Female, age 91, right hemisphere 71.0
2018 Male, age 76, both hemispheres 67.4
Perirhinal gyrus
nTPM: 81.8
1847 Female, age 91, left hemisphere 87.6
1794 Male, age 80, right hemisphere 83.9
2848 Male, age 76, right hemisphere 82.6
1841 Female, age 85, right hemisphere 81.5
2521 Female, age 94, right hemisphere 73.2
Subiculum
nTPM: 71.1
2729 Female, age 91, right hemisphere 79.9
2438 Female, age 94, left hemisphere 76.9
2619 Male, age 74, both hemispheres 72.1
1977 Female, age 85, both hemispheres 68.4
2042 Male, age 76, both hemispheres 66.8
1901 Male, age 80, both hemispheres 62.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.1
Samples: 197

Max nTPM: 61.6
Min nTPM: 15.2
Std nTPM: 8.1
Median nTPM: 34.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 61.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 56.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 52.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 50.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 50.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 50.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 49.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 49.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 48.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 48.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 47.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 104.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.0
FF:10153-102I9 76 years, female 115.6
FF:10169-103B7 60 years, female 92.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.6
Pig sample Sample description nTPM
Subiculum
nTPM: 59.0
Samples: 4

Max nTPM: 80.7
Min nTPM: 48.9
Sample A Female 80.7
Sample B Female 53.0
Sample C Male 53.5
Sample D Male 48.9
Dorsal hippocampus
nTPM: 50.9
Samples: 4

Max nTPM: 57.8
Min nTPM: 46.4
Sample A Female 57.8
Sample B Female 51.1
Sample C Male 48.3
Sample D Male 46.4
Entorhinal cortex
nTPM: 68.6
Samples: 4

Max nTPM: 77.0
Min nTPM: 60.2
Sample A Female 77.0
Sample B Female 66.0
Sample C Male 71.3
Sample D Male 60.2
Ventral hippocampus
nTPM: 53.3
Samples: 4

Max nTPM: 67.8
Min nTPM: 45.0
Sample A Female 47.0
Sample B Female 45.0
Sample C Male 67.8
Sample D Male 53.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 93.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.4
Samples: 4

Max nTPM: 98.7
Min nTPM: 82.8
Sample A Male 98.7
Sample B Male 95.0
Sample C Female 82.8
Sample D Female 97.1
Hippocampal formation
nTPM: 56.6
Samples: 4

Max nTPM: 64.8
Min nTPM: 44.5
Sample A Male 64.8
Sample B Male 53.4
Sample C Female 44.5
Sample D Female 63.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.0
512991 Antisense, RP_040809_02_F09, Mouse strain C57BL/6J (56 days, male) 15.3
81599648 Antisense, RP_071212_04_F09, Mouse strain C57BL/6J (56 days, male) 6.6

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