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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
13.4
nTPM
Monaco:
263.6
nTPM
Schmiedel:
174.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
13.4
HPA sample
nTPM
gdT-cell nTPM: 13.4
Samples: 6
Max nTPM: 40.6
Min nTPM: 4.6
P10809_1007
8.4
P10809_1022
9.5
P10809_1041
4.6
P10809_1060
40.6
P10809_1077
8.6
P10809_1098
8.6
MAIT T-cell nTPM: 11.3
Samples: 6
Max nTPM: 15.6
Min nTPM: 7.6
P10809_1006
7.6
P10809_1024
15.6
P10809_1043
11.1
P10809_1062
11.1
P10809_1083
11.9
P10809_1097
10.2
Memory CD4 T-cell nTPM: 9.3
Samples: 6
Max nTPM: 13.3
Min nTPM: 3.5
P10809_1014
9.7
P10809_1026
13.3
P10809_1045
9.3
P10809_1064
3.5
P10809_1086
8.5
P10809_1113
11.6
Memory CD8 T-cell nTPM: 8.2
Samples: 5
Max nTPM: 12.8
Min nTPM: 2.3
P10809_1012
12.8
P10809_1027
9.5
P10809_1046
11.4
P10809_1065
4.9
P10809_1111
2.3
Naive CD4 T-cell nTPM: 9.3
Samples: 6
Max nTPM: 16.5
Min nTPM: 3.8
P10809_1015
11.5
P10809_1030
16.5
P10809_1049
8.8
P10809_1068
5.7
P10809_1085
3.8
P10809_1112
9.5
Naive CD8 T-cell nTPM: 10.3
Samples: 6
Max nTPM: 14.0
Min nTPM: 6.3
P10809_1016
10.5
P10809_1031
14.0
P10809_1050
13.7
P10809_1069
6.3
P10809_1087
8.2
P10809_1110
8.9
T-reg nTPM: 7.0
Samples: 6
Max nTPM: 9.2
Min nTPM: 3.5
P10809_1018
8.0
P10809_1037
6.9
P10809_1056
9.2
P10809_1075
3.5
P10809_1094
5.9
P10809_1106
8.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
263.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 185.4
Samples: 4
Max nTPM: 273.8
Min nTPM: 119.7
RHH5202_R3573
173.5
RHH5230_R3602
273.8
RHH5259_R3631
119.7
RHH5288_R3660
174.6
Effector memory CD8 T-cell nTPM: 225.1
Samples: 4
Max nTPM: 317.9
Min nTPM: 172.3
RHH5203_R3574
172.3
RHH5231_R3603
317.9
RHH5260_R3632
205.6
RHH5289_R3661
204.7
MAIT T-cell nTPM: 160.7
Samples: 4
Max nTPM: 217.5
Min nTPM: 118.8
RHH5233_R3605
217.5
RHH5205_R3576
118.8
RHH5262_R3634
187.7
RHH5297_R3663
118.8
Memory CD4 T-cell TFH nTPM: 241.3
Samples: 4
Max nTPM: 439.6
Min nTPM: 137.7
RHH5300_R3666
137.7
RHH5236_R3608
439.6
RHH5265_R3637
173.5
RHH5208_R3579
214.2
Memory CD4 T-cell Th1 nTPM: 190.8
Samples: 4
Max nTPM: 287.6
Min nTPM: 132.1
RHH5210_R3581
153.6
RHH5302_R3668
189.7
RHH5238_R3610
287.6
RHH5267_R3639
132.1
Memory CD4 T-cell Th1/Th17 nTPM: 206.4
Samples: 4
Max nTPM: 242.3
Min nTPM: 163.6
RHH5303_R3669
204.2
RHH5211_R3582
242.3
RHH5239_R3611
215.6
RHH5268_R3640
163.6
Memory CD4 T-cell Th17 nTPM: 172.3
Samples: 4
Max nTPM: 232.9
Min nTPM: 124.1
RHH5304_R3670
124.1
RHH5212_R3583
196.6
RHH5240_R3612
232.9
RHH5269_R3641
135.5
Memory CD4 T-cell Th2 nTPM: 201.3
Samples: 4
Max nTPM: 254.0
Min nTPM: 155.8
RHH5305_R3671
190.5
RHH5213_R3584
204.7
RHH5241_R3613
254.0
RHH5270_R3642
155.8
Naive CD4 T-cell nTPM: 208.4
Samples: 4
Max nTPM: 284.3
Min nTPM: 167.5
RHH5306_R3672
174.5
RHH5214_R3585
207.4
RHH5242_R3614
284.3
RHH5271_R3643
167.5
Naive CD8 T-cell nTPM: 226.3
Samples: 4
Max nTPM: 308.0
Min nTPM: 184.0
RHH5201_R3572
186.0
RHH5229_R3601
308.0
RHH5258_R3630
227.1
RHH5287_R3659
184.0
Non-Vd2 gdTCR nTPM: 192.2
Samples: 4
Max nTPM: 247.7
Min nTPM: 132.9
RHH5235_R3607
217.5
RHH5264_R3636
247.7
RHH5207_R3578
170.7
RHH5299_R3665
132.9
T-reg nTPM: 198.1
Samples: 4
Max nTPM: 303.9
Min nTPM: 146.3
RHH5301_R3667
167.8
RHH5237_R3609
303.9
RHH5266_R3638
146.3
RHH5209_R3580
174.5
Terminal effector memory CD4 T-cell nTPM: 263.6
Samples: 2
Max nTPM: 287.8
Min nTPM: 239.4
RHH5243_R3615
287.8
RHH5272_R3644
239.4
Terminal effector memory CD8 T-cell nTPM: 209.5
Samples: 4
Max nTPM: 269.0
Min nTPM: 159.9
RHH5232_R3604
269.0
RHH5204_R3575
170.8
RHH5261_R3633
238.3
RHH5296_R3662
159.9
Vd2 gdTCR nTPM: 216.5
Samples: 4
Max nTPM: 282.6
Min nTPM: 142.9
RHH5234_R3606
282.6
RHH5206_R3577
239.2
RHH5263_R3635
201.3
RHH5298_R3664
142.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
