HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.7 nTPM
HPA Brain:27.9 nTPM
GTEx:17.7 nTPM
FANTOM5:20.5 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:30.2 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041350Antibody HPA042182
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.9
Sample id Sample description nTPM
Hippocampus
nTPM: 24.0
1898 Male, age 80, left hemisphere 29.5
2148 Female, age 91, left hemisphere 25.3
2621 Female, age 67, right hemisphere 22.8
1911 Female, age 85, right hemisphere 22.6
2529 Female, age 94, left hemisphere 22.2
1855 Male, age 76, left hemisphere 21.7
Dentate gyrus
nTPM: 23.1
1927 Female, age 91, both hemispheres 29.6
2010 Male, age 76, both hemispheres 25.0
2530 Female, age 94, left hemisphere 21.9
2528 Male, age 74, both hemispheres 21.7
2246 Female, age 85, both hemispheres 20.6
2531 Female, age 67, both hemispheres 19.5
Entorhinal gyrus
nTPM: 24.8
2764 Male, age 80, right hemisphere 28.4
2613 Female, age 94, left hemisphere 26.5
1938 Female, age 85, left hemisphere 25.5
2686 Male, age 75, right hemisphere 23.5
1787 Male, age 76, left hemisphere 23.0
2117 Female, age 91, right hemisphere 21.6
Hippocampus, CA1
nTPM: 26.3
2749 Male, age 80, left hemisphere 36.6
1873 Female, age 85, both hemispheres 25.2
2527 Male, age 74, both hemispheres 24.6
2045 Male, age 76, both hemispheres 23.3
2082 Female, age 91, right hemisphere 21.9
Hippocampus, CA2
nTPM: 23.9
1963 Male, age 80, left hemisphere 31.0
1892 Male, age 76, both hemispheres 27.0
2249 Male, age 74, both hemispheres 23.1
2437 Female, age 94, left hemisphere 22.6
1940 Female, age 85, left hemisphere 20.1
2113 Female, age 91, right hemisphere 19.3
Hippocampus, CA3
nTPM: 26.7
2436 Male, age 74, both hemispheres 33.3
2137 Male, age 80, left hemisphere 31.1
1867 Male, age 76, both hemispheres 26.7
2861 Female, age 67, both hemispheres 24.2
2620 Female, age 94, left hemisphere 23.2
1891 Female, age 85, both hemispheres 21.6
Parahippocampal cortex
nTPM: 25.3
1850 Male, age 80, both hemispheres 30.2
1990 Female, age 91, right hemisphere 27.4
1933 Female, age 85, both hemispheres 26.6
2532 Female, age 72, left hemisphere 25.7
2693 Female, age 94, both hemispheres 25.7
2250 Female, age 67, right hemisphere 24.7
2245 Female, age 91, both hemispheres 24.4
2018 Male, age 76, both hemispheres 24.1
2622 Female, age 67, right hemisphere 23.4
2692 Male, age 74, both hemispheres 21.0
Perirhinal gyrus
nTPM: 27.9
1847 Female, age 91, left hemisphere 36.8
1794 Male, age 80, right hemisphere 27.9
1841 Female, age 85, right hemisphere 26.9
2521 Female, age 94, right hemisphere 25.3
2848 Male, age 76, right hemisphere 22.6
Subiculum
nTPM: 22.6
2438 Female, age 94, left hemisphere 25.4
1901 Male, age 80, both hemispheres 24.3
2619 Male, age 74, both hemispheres 23.0
1977 Female, age 85, both hemispheres 22.8
2729 Female, age 91, right hemisphere 21.4
2042 Male, age 76, both hemispheres 18.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.7
Samples: 197

Max nTPM: 34.6
Min nTPM: 9.7
Std nTPM: 4.3
Median nTPM: 16.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 34.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 29.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 28.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 28.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 28.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 27.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 26.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 26.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 25.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 25.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.5
FF:10169-103B7 60 years, female 22.8
FF:10153-102I9 76 years, female 18.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.1
Pig sample Sample description nTPM
Subiculum
nTPM: 24.1
Samples: 4

Max nTPM: 34.4
Min nTPM: 18.7
Sample A Female 34.4
Sample B Female 23.0
Sample C Male 20.4
Sample D Male 18.7
Dorsal hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 36.7
Min nTPM: 19.2
Sample A Female 36.7
Sample B Female 26.0
Sample C Male 22.5
Sample D Male 19.2
Entorhinal cortex
nTPM: 24.6
Samples: 4

Max nTPM: 28.7
Min nTPM: 19.9
Sample A Female 28.7
Sample B Female 27.3
Sample C Male 22.5
Sample D Male 19.9
Ventral hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 30.5
Min nTPM: 18.0
Sample A Female 28.4
Sample B Female 18.0
Sample C Male 30.5
Sample D Male 25.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.2
Samples: 4

Max nTPM: 32.2
Min nTPM: 26.4
Sample A Male 32.0
Sample B Male 26.4
Sample C Female 30.2
Sample D Female 32.2
Hippocampal formation
nTPM: 29.5
Samples: 4

Max nTPM: 31.2
Min nTPM: 28.3
Sample A Male 29.9
Sample B Male 28.5
Sample C Female 28.3
Sample D Female 31.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
68193065 Antisense, RP_040914_01_D01, Mouse strain C57BL/6J (56 days, male) 1.9

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