HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.7 nTPM
HPA Brain:66.7 nTPM
GTEx:15.7 nTPM
FANTOM5:101.1 Scaled Tags Per Million
Pig:41.5 nTPM
Mouse:62.6 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.7
Sample id Sample description nTPM
Hippocampus
nTPM: 43.9
1898 Male, age 80, left hemisphere 61.0
2621 Female, age 67, right hemisphere 46.4
1855 Male, age 76, left hemisphere 43.9
2148 Female, age 91, left hemisphere 42.3
1911 Female, age 85, right hemisphere 35.6
2529 Female, age 94, left hemisphere 34.4
Dentate gyrus
nTPM: 46.4
1927 Female, age 91, both hemispheres 56.4
2531 Female, age 67, both hemispheres 52.7
2246 Female, age 85, both hemispheres 45.6
2010 Male, age 76, both hemispheres 45.3
2528 Male, age 74, both hemispheres 42.4
2530 Female, age 94, left hemisphere 35.9
Entorhinal gyrus
nTPM: 48.2
2764 Male, age 80, right hemisphere 56.3
1938 Female, age 85, left hemisphere 52.8
2613 Female, age 94, left hemisphere 52.1
1787 Male, age 76, left hemisphere 49.5
2686 Male, age 75, right hemisphere 43.5
2117 Female, age 91, right hemisphere 35.0
Hippocampus, CA1
nTPM: 51.9
2749 Male, age 80, left hemisphere 78.6
1873 Female, age 85, both hemispheres 53.5
2045 Male, age 76, both hemispheres 49.5
2527 Male, age 74, both hemispheres 40.7
2082 Female, age 91, right hemisphere 37.0
Hippocampus, CA2
nTPM: 46.9
1963 Male, age 80, left hemisphere 60.4
1892 Male, age 76, both hemispheres 60.1
1940 Female, age 85, left hemisphere 46.6
2249 Male, age 74, both hemispheres 39.0
2113 Female, age 91, right hemisphere 38.0
2437 Female, age 94, left hemisphere 37.1
Hippocampus, CA3
nTPM: 49.4
2620 Female, age 94, left hemisphere 63.3
2137 Male, age 80, left hemisphere 61.4
1867 Male, age 76, both hemispheres 48.3
2861 Female, age 67, both hemispheres 46.5
1891 Female, age 85, both hemispheres 40.9
2436 Male, age 74, both hemispheres 35.7
Parahippocampal cortex
nTPM: 47.7
1850 Male, age 80, both hemispheres 69.3
2693 Female, age 94, both hemispheres 52.3
1933 Female, age 85, both hemispheres 51.5
1990 Female, age 91, right hemisphere 48.5
2250 Female, age 67, right hemisphere 46.8
2245 Female, age 91, both hemispheres 46.6
2532 Female, age 72, left hemisphere 44.7
2018 Male, age 76, both hemispheres 41.2
2622 Female, age 67, right hemisphere 39.8
2692 Male, age 74, both hemispheres 35.8
Perirhinal gyrus
nTPM: 66.7
1794 Male, age 80, right hemisphere 76.9
1847 Female, age 91, left hemisphere 74.5
1841 Female, age 85, right hemisphere 66.6
2521 Female, age 94, right hemisphere 61.6
2848 Male, age 76, right hemisphere 53.9
Subiculum
nTPM: 38.2
1977 Female, age 85, both hemispheres 49.9
1901 Male, age 80, both hemispheres 44.8
2619 Male, age 74, both hemispheres 36.6
2729 Female, age 91, right hemisphere 36.2
2438 Female, age 94, left hemisphere 35.2
2042 Male, age 76, both hemispheres 26.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.7
Samples: 197

Max nTPM: 46.4
Min nTPM: 4.3
Std nTPM: 7.7
Median nTPM: 13.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 46.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 40.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 39.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 38.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 37.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 36.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 36.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 36.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 35.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 34.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 32.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.1
FF:10153-102I9 76 years, female 109.8
FF:10169-103B7 60 years, female 92.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.5
Pig sample Sample description nTPM
Subiculum
nTPM: 39.1
Samples: 4

Max nTPM: 44.5
Min nTPM: 35.5
Sample A Female 44.5
Sample B Female 36.7
Sample C Male 39.5
Sample D Male 35.5
Dorsal hippocampus
nTPM: 39.0
Samples: 4

Max nTPM: 44.6
Min nTPM: 33.0
Sample A Female 37.0
Sample B Female 44.6
Sample C Male 33.0
Sample D Male 41.5
Entorhinal cortex
nTPM: 41.5
Samples: 4

Max nTPM: 43.3
Min nTPM: 39.1
Sample A Female 43.2
Sample B Female 40.5
Sample C Male 43.3
Sample D Male 39.1
Ventral hippocampus
nTPM: 39.1
Samples: 4

Max nTPM: 41.9
Min nTPM: 36.8
Sample A Female 39.4
Sample B Female 36.8
Sample C Male 38.1
Sample D Male 41.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.2
Samples: 4

Max nTPM: 74.2
Min nTPM: 53.1
Sample A Male 59.6
Sample B Male 53.8
Sample C Female 53.1
Sample D Female 74.2
Hippocampal formation
nTPM: 62.6
Samples: 4

Max nTPM: 78.0
Min nTPM: 46.8
Sample A Male 47.7
Sample B Male 77.9
Sample C Female 78.0
Sample D Female 46.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
71234742 Antisense, RP_050505_04_D04, Mouse strain C57BL/6J (56 days, male) 14.4

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