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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
20.6
nTPM
Monaco:
133.3
nTPM
Schmiedel:
170.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
20.6
HPA sample
nTPM
gdT-cell nTPM: 16.0
Samples: 6
Max nTPM: 23.0
Min nTPM: 10.2
P10809_1007
14.6
P10809_1022
18.0
P10809_1041
23.0
P10809_1060
14.9
P10809_1077
15.4
P10809_1098
10.2
MAIT T-cell nTPM: 16.9
Samples: 6
Max nTPM: 22.4
Min nTPM: 12.6
P10809_1006
17.3
P10809_1024
12.6
P10809_1043
17.6
P10809_1062
13.3
P10809_1083
22.4
P10809_1097
18.2
Memory CD4 T-cell nTPM: 14.0
Samples: 6
Max nTPM: 16.7
Min nTPM: 11.3
P10809_1014
11.4
P10809_1026
11.3
P10809_1045
14.1
P10809_1064
16.7
P10809_1086
16.2
P10809_1113
14.1
Memory CD8 T-cell nTPM: 14.3
Samples: 5
Max nTPM: 17.6
Min nTPM: 12.5
P10809_1012
12.5
P10809_1027
17.6
P10809_1046
12.6
P10809_1065
15.9
P10809_1111
13.1
Naive CD4 T-cell nTPM: 6.4
Samples: 6
Max nTPM: 7.5
Min nTPM: 4.5
P10809_1015
7.5
P10809_1030
4.5
P10809_1049
7.0
P10809_1068
6.9
P10809_1085
5.7
P10809_1112
6.5
Naive CD8 T-cell nTPM: 8.0
Samples: 6
Max nTPM: 14.5
Min nTPM: 1.5
P10809_1016
9.8
P10809_1031
1.5
P10809_1050
8.5
P10809_1069
9.0
P10809_1087
14.5
P10809_1110
4.7
T-reg nTPM: 20.6
Samples: 6
Max nTPM: 27.9
Min nTPM: 14.1
P10809_1018
18.8
P10809_1037
21.3
P10809_1056
21.8
P10809_1075
14.1
P10809_1094
27.9
P10809_1106
19.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
133.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 100.8
Samples: 4
Max nTPM: 112.8
Min nTPM: 88.9
RHH5202_R3573
108.3
RHH5230_R3602
93.3
RHH5259_R3631
112.8
RHH5288_R3660
88.9
Effector memory CD8 T-cell nTPM: 128.5
Samples: 4
Max nTPM: 136.5
Min nTPM: 120.3
RHH5203_R3574
136.5
RHH5231_R3603
120.3
RHH5260_R3632
136.1
RHH5289_R3661
121.0
MAIT T-cell nTPM: 122.1
Samples: 4
Max nTPM: 153.8
Min nTPM: 102.4
RHH5233_R3605
123.0
RHH5205_R3576
153.8
RHH5262_R3634
109.2
RHH5297_R3663
102.4
Memory CD4 T-cell TFH nTPM: 113.0
Samples: 4
Max nTPM: 125.9
Min nTPM: 94.3
RHH5300_R3666
94.3
RHH5236_R3608
125.9
RHH5265_R3637
107.9
RHH5208_R3579
123.8
Memory CD4 T-cell Th1 nTPM: 119.7
Samples: 4
Max nTPM: 151.5
Min nTPM: 87.8
RHH5210_R3581
123.6
RHH5302_R3668
87.8
RHH5238_R3610
151.5
RHH5267_R3639
115.7
Memory CD4 T-cell Th1/Th17 nTPM: 132.4
Samples: 4
Max nTPM: 193.1
Min nTPM: 103.6
RHH5303_R3669
116.9
RHH5211_R3582
103.6
RHH5239_R3611
193.1
RHH5268_R3640
116.1
Memory CD4 T-cell Th17 nTPM: 131.1
Samples: 4
Max nTPM: 156.1
Min nTPM: 107.8
RHH5304_R3670
123.5
RHH5212_R3583
107.8
RHH5240_R3612
156.1
RHH5269_R3641
137.0
Memory CD4 T-cell Th2 nTPM: 109.2
Samples: 4
Max nTPM: 130.4
Min nTPM: 87.4
RHH5305_R3671
87.4
RHH5213_R3584
113.6
RHH5241_R3613
130.4
RHH5270_R3642
105.3
Naive CD4 T-cell nTPM: 80.8
Samples: 4
Max nTPM: 94.7
Min nTPM: 65.2
RHH5306_R3672
69.6
RHH5214_R3585
65.2
RHH5242_R3614
93.7
RHH5271_R3643
94.7
Naive CD8 T-cell nTPM: 89.0
Samples: 4
Max nTPM: 103.7
Min nTPM: 68.4
RHH5201_R3572
103.7
RHH5229_R3601
90.4
RHH5258_R3630
68.4
RHH5287_R3659
93.6
Non-Vd2 gdTCR nTPM: 127.9
Samples: 4
Max nTPM: 158.7
Min nTPM: 94.4
RHH5235_R3607
158.7
RHH5264_R3636
94.4
RHH5207_R3578
138.1
RHH5299_R3665
120.5
T-reg nTPM: 88.5
Samples: 4
Max nTPM: 96.7
Min nTPM: 82.6
RHH5301_R3667
82.6
RHH5237_R3609
96.7
RHH5266_R3638
88.1
RHH5209_R3580
86.4
Terminal effector memory CD4 T-cell nTPM: 125.9
Samples: 2
Max nTPM: 136.0
Min nTPM: 115.8
RHH5243_R3615
136.0
RHH5272_R3644
115.8
Terminal effector memory CD8 T-cell nTPM: 133.3
Samples: 4
Max nTPM: 173.7
Min nTPM: 100.4
RHH5232_R3604
173.7
RHH5204_R3575
111.4
RHH5261_R3633
100.4
RHH5296_R3662
147.8
Vd2 gdTCR nTPM: 106.8
Samples: 4
Max nTPM: 128.4
Min nTPM: 84.7
RHH5234_R3606
118.8
RHH5206_R3577
95.2
RHH5263_R3635
128.4
RHH5298_R3664
84.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
