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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
86.1
nTPM
Monaco:
49.0
nTPM
Schmiedel:
39.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
86.1
HPA sample
nTPM
gdT-cell nTPM: 86.1
Samples: 6
Max nTPM: 108.6
Min nTPM: 59.1
P10809_1007
59.1
P10809_1022
92.1
P10809_1041
108.6
P10809_1060
95.9
P10809_1077
68.6
P10809_1098
92.5
MAIT T-cell nTPM: 69.4
Samples: 6
Max nTPM: 83.4
Min nTPM: 41.4
P10809_1006
41.4
P10809_1024
77.1
P10809_1043
79.1
P10809_1062
76.3
P10809_1083
59.1
P10809_1097
83.4
Memory CD4 T-cell nTPM: 67.1
Samples: 6
Max nTPM: 91.2
Min nTPM: 42.2
P10809_1014
42.2
P10809_1026
91.2
P10809_1045
64.2
P10809_1064
75.5
P10809_1086
53.5
P10809_1113
75.7
Memory CD8 T-cell nTPM: 80.8
Samples: 5
Max nTPM: 106.9
Min nTPM: 46.8
P10809_1012
46.8
P10809_1027
106.9
P10809_1046
90.9
P10809_1065
80.2
P10809_1111
79.3
Naive CD4 T-cell nTPM: 52.0
Samples: 6
Max nTPM: 65.5
Min nTPM: 30.1
P10809_1015
30.1
P10809_1030
49.0
P10809_1049
55.0
P10809_1068
65.5
P10809_1085
50.6
P10809_1112
61.7
Naive CD8 T-cell nTPM: 63.7
Samples: 6
Max nTPM: 82.5
Min nTPM: 41.0
P10809_1016
41.0
P10809_1031
66.6
P10809_1050
64.9
P10809_1069
82.5
P10809_1087
64.0
P10809_1110
63.3
T-reg nTPM: 84.3
Samples: 6
Max nTPM: 116.1
Min nTPM: 60.7
P10809_1018
68.0
P10809_1037
71.4
P10809_1056
116.1
P10809_1075
102.2
P10809_1094
60.7
P10809_1106
87.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 28.6
Samples: 4
Max nTPM: 37.7
Min nTPM: 21.5
RHH5202_R3573
27.3
RHH5230_R3602
21.5
RHH5259_R3631
27.8
RHH5288_R3660
37.7
Effector memory CD8 T-cell nTPM: 31.8
Samples: 4
Max nTPM: 36.1
Min nTPM: 29.9
RHH5203_R3574
29.9
RHH5231_R3603
36.1
RHH5260_R3632
30.5
RHH5289_R3661
30.7
MAIT T-cell nTPM: 34.6
Samples: 4
Max nTPM: 50.9
Min nTPM: 22.8
RHH5233_R3605
29.2
RHH5205_R3576
22.8
RHH5262_R3634
35.4
RHH5297_R3663
50.9
Memory CD4 T-cell TFH nTPM: 31.8
Samples: 4
Max nTPM: 45.7
Min nTPM: 21.7
RHH5300_R3666
29.6
RHH5236_R3608
45.7
RHH5265_R3637
21.7
RHH5208_R3579
30.0
Memory CD4 T-cell Th1 nTPM: 29.6
Samples: 4
Max nTPM: 45.3
Min nTPM: 18.8
RHH5210_R3581
34.1
RHH5302_R3668
45.3
RHH5238_R3610
20.2
RHH5267_R3639
18.8
Memory CD4 T-cell Th1/Th17 nTPM: 36.7
Samples: 4
Max nTPM: 58.0
Min nTPM: 13.6
RHH5303_R3669
58.0
RHH5211_R3582
43.9
RHH5239_R3611
13.6
RHH5268_R3640
31.2
Memory CD4 T-cell Th17 nTPM: 27.9
Samples: 4
Max nTPM: 43.9
Min nTPM: 14.1
RHH5304_R3670
31.0
RHH5212_R3583
43.9
RHH5240_R3612
14.1
RHH5269_R3641
22.5
Memory CD4 T-cell Th2 nTPM: 29.3
Samples: 4
Max nTPM: 37.3
Min nTPM: 23.5
RHH5305_R3671
32.0
RHH5213_R3584
23.5
RHH5241_R3613
37.3
RHH5270_R3642
24.3
Naive CD4 T-cell nTPM: 29.2
Samples: 4
Max nTPM: 45.3
Min nTPM: 14.3
RHH5306_R3672
32.6
RHH5214_R3585
45.3
RHH5242_R3614
24.5
RHH5271_R3643
14.3
Naive CD8 T-cell nTPM: 21.5
Samples: 4
Max nTPM: 35.2
Min nTPM: 9.9
RHH5201_R3572
17.1
RHH5229_R3601
9.9
RHH5258_R3630
35.2
RHH5287_R3659
23.9
Non-Vd2 gdTCR nTPM: 39.7
Samples: 4
Max nTPM: 58.3
Min nTPM: 26.0
RHH5235_R3607
26.0
RHH5264_R3636
43.1
RHH5207_R3578
31.5
RHH5299_R3665
58.3
T-reg nTPM: 31.1
Samples: 4
Max nTPM: 41.4
Min nTPM: 18.6
RHH5301_R3667
38.7
RHH5237_R3609
41.4
RHH5266_R3638
18.6
RHH5209_R3580
25.7
Terminal effector memory CD4 T-cell nTPM: 28.4
Samples: 2
Max nTPM: 35.9
Min nTPM: 20.8
RHH5243_R3615
20.8
RHH5272_R3644
35.9
Terminal effector memory CD8 T-cell nTPM: 49.1
Samples: 4
Max nTPM: 74.2
Min nTPM: 25.9
RHH5232_R3604
45.5
RHH5204_R3575
74.2
RHH5261_R3633
25.9
RHH5296_R3662
50.6
Vd2 gdTCR nTPM: 44.5
Samples: 4
Max nTPM: 66.3
Min nTPM: 29.4
RHH5234_R3606
31.3
RHH5206_R3577
51.0
RHH5263_R3635
29.4
RHH5298_R3664
66.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
