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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
113.0
nTPM
Monaco:
64.4
nTPM
Schmiedel:
103.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
113.0
HPA sample
nTPM
gdT-cell nTPM: 78.4
Samples: 6
Max nTPM: 87.5
Min nTPM: 67.3
P10809_1007
81.8
P10809_1022
87.5
P10809_1041
82.1
P10809_1060
71.3
P10809_1077
67.3
P10809_1098
80.4
MAIT T-cell nTPM: 95.0
Samples: 6
Max nTPM: 107.8
Min nTPM: 73.9
P10809_1006
87.9
P10809_1024
107.6
P10809_1043
97.7
P10809_1062
94.8
P10809_1083
73.9
P10809_1097
107.8
Memory CD4 T-cell nTPM: 105.9
Samples: 6
Max nTPM: 116.6
Min nTPM: 95.6
P10809_1014
116.6
P10809_1026
116.4
P10809_1045
107.9
P10809_1064
99.5
P10809_1086
95.6
P10809_1113
99.2
Memory CD8 T-cell nTPM: 81.9
Samples: 5
Max nTPM: 103.0
Min nTPM: 64.0
P10809_1012
103.0
P10809_1027
82.9
P10809_1046
82.8
P10809_1065
64.0
P10809_1111
76.6
Naive CD4 T-cell nTPM: 110.7
Samples: 6
Max nTPM: 140.6
Min nTPM: 97.4
P10809_1015
97.4
P10809_1030
140.6
P10809_1049
118.3
P10809_1068
102.8
P10809_1085
97.9
P10809_1112
107.4
Naive CD8 T-cell nTPM: 95.4
Samples: 6
Max nTPM: 122.8
Min nTPM: 72.5
P10809_1016
122.8
P10809_1031
102.2
P10809_1050
86.8
P10809_1069
104.2
P10809_1087
72.5
P10809_1110
83.6
T-reg nTPM: 113.0
Samples: 6
Max nTPM: 169.8
Min nTPM: 88.1
P10809_1018
116.6
P10809_1037
119.5
P10809_1056
169.8
P10809_1075
88.1
P10809_1094
92.9
P10809_1106
91.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 49.7
Samples: 4
Max nTPM: 71.0
Min nTPM: 33.6
RHH5202_R3573
33.6
RHH5230_R3602
40.2
RHH5259_R3631
53.9
RHH5288_R3660
71.0
Effector memory CD8 T-cell nTPM: 27.5
Samples: 4
Max nTPM: 37.5
Min nTPM: 16.3
RHH5203_R3574
16.3
RHH5231_R3603
27.1
RHH5260_R3632
37.5
RHH5289_R3661
28.9
MAIT T-cell nTPM: 44.7
Samples: 4
Max nTPM: 61.4
Min nTPM: 29.3
RHH5233_R3605
31.8
RHH5205_R3576
29.3
RHH5262_R3634
56.3
RHH5297_R3663
61.4
Memory CD4 T-cell TFH nTPM: 61.2
Samples: 4
Max nTPM: 101.7
Min nTPM: 36.7
RHH5300_R3666
65.3
RHH5236_R3608
101.7
RHH5265_R3637
41.0
RHH5208_R3579
36.7
Memory CD4 T-cell Th1 nTPM: 60.1
Samples: 4
Max nTPM: 90.4
Min nTPM: 38.8
RHH5210_R3581
38.8
RHH5302_R3668
90.4
RHH5238_R3610
64.0
RHH5267_R3639
47.2
Memory CD4 T-cell Th1/Th17 nTPM: 57.7
Samples: 4
Max nTPM: 77.4
Min nTPM: 38.7
RHH5303_R3669
77.4
RHH5211_R3582
60.0
RHH5239_R3611
38.7
RHH5268_R3640
54.5
Memory CD4 T-cell Th17 nTPM: 48.0
Samples: 4
Max nTPM: 52.3
Min nTPM: 44.2
RHH5304_R3670
46.5
RHH5212_R3583
49.1
RHH5240_R3612
52.3
RHH5269_R3641
44.2
Memory CD4 T-cell Th2 nTPM: 54.2
Samples: 4
Max nTPM: 61.9
Min nTPM: 48.0
RHH5305_R3671
61.9
RHH5213_R3584
51.9
RHH5241_R3613
54.9
RHH5270_R3642
48.0
Naive CD4 T-cell nTPM: 55.5
Samples: 4
Max nTPM: 74.4
Min nTPM: 34.4
RHH5306_R3672
66.4
RHH5214_R3585
74.4
RHH5242_R3614
34.4
RHH5271_R3643
46.8
Naive CD8 T-cell nTPM: 42.6
Samples: 4
Max nTPM: 62.5
Min nTPM: 23.6
RHH5201_R3572
23.6
RHH5229_R3601
40.7
RHH5258_R3630
62.5
RHH5287_R3659
43.5
Non-Vd2 gdTCR nTPM: 41.8
Samples: 4
Max nTPM: 72.3
Min nTPM: 24.1
RHH5235_R3607
24.1
RHH5264_R3636
39.5
RHH5207_R3578
31.3
RHH5299_R3665
72.3
T-reg nTPM: 55.5
Samples: 4
Max nTPM: 71.8
Min nTPM: 36.6
RHH5301_R3667
65.8
RHH5237_R3609
71.8
RHH5266_R3638
36.6
RHH5209_R3580
47.6
Terminal effector memory CD4 T-cell nTPM: 42.9
Samples: 2
Max nTPM: 55.7
Min nTPM: 30.1
RHH5243_R3615
30.1
RHH5272_R3644
55.7
Terminal effector memory CD8 T-cell nTPM: 50.1
Samples: 4
Max nTPM: 77.6
Min nTPM: 33.5
RHH5232_R3604
33.5
RHH5204_R3575
77.6
RHH5261_R3633
39.3
RHH5296_R3662
49.9
Vd2 gdTCR nTPM: 64.5
Samples: 4
Max nTPM: 100.4
Min nTPM: 43.9
RHH5234_R3606
50.2
RHH5206_R3577
63.3
RHH5263_R3635
43.9
RHH5298_R3664
100.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
