HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.9 nTPM
HPA Brain:17.5 nTPM
GTEx:11.9 nTPM
FANTOM5:26.0 Scaled Tags Per Million
Pig:15.4 nTPM
Mouse:10.4 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.5
Sample id Sample description nTPM
Hippocampus
nTPM: 12.7
2529 Female, age 94, left hemisphere 16.0
1911 Female, age 85, right hemisphere 14.5
1898 Male, age 80, left hemisphere 13.6
2621 Female, age 67, right hemisphere 12.4
2148 Female, age 91, left hemisphere 10.4
1855 Male, age 76, left hemisphere 9.5
Dentate gyrus
nTPM: 12.2
2530 Female, age 94, left hemisphere 14.6
2528 Male, age 74, both hemispheres 13.9
2010 Male, age 76, both hemispheres 13.3
2246 Female, age 85, both hemispheres 11.1
1927 Female, age 91, both hemispheres 10.5
2531 Female, age 67, both hemispheres 9.9
Entorhinal gyrus
nTPM: 14.4
2117 Female, age 91, right hemisphere 21.1
2764 Male, age 80, right hemisphere 16.7
1787 Male, age 76, left hemisphere 13.5
1938 Female, age 85, left hemisphere 13.5
2613 Female, age 94, left hemisphere 10.9
2686 Male, age 75, right hemisphere 10.6
Hippocampus, CA1
nTPM: 13.2
2082 Female, age 91, right hemisphere 14.7
2045 Male, age 76, both hemispheres 14.6
2527 Male, age 74, both hemispheres 13.8
2749 Male, age 80, left hemisphere 12.9
1873 Female, age 85, both hemispheres 9.9
Hippocampus, CA2
nTPM: 14.7
2113 Female, age 91, right hemisphere 16.7
2437 Female, age 94, left hemisphere 15.7
1963 Male, age 80, left hemisphere 14.7
1892 Male, age 76, both hemispheres 14.4
2249 Male, age 74, both hemispheres 14.0
1940 Female, age 85, left hemisphere 13.0
Hippocampus, CA3
nTPM: 13.4
1891 Female, age 85, both hemispheres 18.0
1867 Male, age 76, both hemispheres 17.4
2137 Male, age 80, left hemisphere 13.9
2436 Male, age 74, both hemispheres 13.9
2620 Female, age 94, left hemisphere 8.9
2861 Female, age 67, both hemispheres 8.4
Parahippocampal cortex
nTPM: 14.2
2018 Male, age 76, both hemispheres 18.6
1990 Female, age 91, right hemisphere 16.5
2245 Female, age 91, both hemispheres 15.8
2532 Female, age 72, left hemisphere 15.5
1850 Male, age 80, both hemispheres 15.3
2693 Female, age 94, both hemispheres 14.2
2692 Male, age 74, both hemispheres 13.3
2250 Female, age 67, right hemisphere 12.4
1933 Female, age 85, both hemispheres 12.2
2622 Female, age 67, right hemisphere 7.9
Perirhinal gyrus
nTPM: 14.2
2521 Female, age 94, right hemisphere 17.9
2848 Male, age 76, right hemisphere 15.9
1794 Male, age 80, right hemisphere 13.4
1847 Female, age 91, left hemisphere 12.2
1841 Female, age 85, right hemisphere 11.8
Subiculum
nTPM: 17.5
2042 Male, age 76, both hemispheres 24.0
1901 Male, age 80, both hemispheres 21.2
1977 Female, age 85, both hemispheres 17.5
2438 Female, age 94, left hemisphere 15.6
2619 Male, age 74, both hemispheres 13.6
2729 Female, age 91, right hemisphere 13.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.9
Samples: 197

Max nTPM: 36.1
Min nTPM: 3.7
Std nTPM: 5.4
Median nTPM: 10.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 36.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 32.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 30.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 28.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 27.7
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 26.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 25.9
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 24.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 24.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 23.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.0
FF:10153-102I9 76 years, female 30.2
FF:10169-103B7 60 years, female 21.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.4
Pig sample Sample description nTPM
Subiculum
nTPM: 15.4
Samples: 4

Max nTPM: 17.0
Min nTPM: 13.6
Sample A Female 17.0
Sample B Female 13.6
Sample C Male 15.6
Sample D Male 15.2
Dorsal hippocampus
nTPM: 13.8
Samples: 4

Max nTPM: 17.4
Min nTPM: 9.3
Sample A Female 15.5
Sample B Female 13.0
Sample C Male 17.4
Sample D Male 9.3
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 16.8
Min nTPM: 11.2
Sample A Female 16.8
Sample B Female 14.6
Sample C Male 13.7
Sample D Male 11.2
Ventral hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 14.9
Min nTPM: 10.7
Sample A Female 10.7
Sample B Female 12.2
Sample C Male 14.7
Sample D Male 14.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 10.2
Min nTPM: 9.0
Sample A Male 9.0
Sample B Male 10.0
Sample C Female 10.2
Sample D Female 10.0
Hippocampal formation
nTPM: 10.4
Samples: 4

Max nTPM: 11.3
Min nTPM: 9.8
Sample A Male 11.3
Sample B Male 10.0
Sample C Female 9.8
Sample D Female 10.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
294041 Antisense, RP_040617_02_E11, Mouse strain C57BL/6J (56 days, male) 3.8
77278965 Antisense, RP_070116_01_A02, Mouse strain C57BL/6J (56 days, male) 0.8

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