HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:38.7 nTPM
HPA Brain:27.8 nTPM
GTEx:38.7 nTPM
FANTOM5:40.9 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:54.4 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014141
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.8
Sample id Sample description nTPM
Hippocampus
nTPM: 25.3
1911 Female, age 85, right hemisphere 29.1
2529 Female, age 94, left hemisphere 28.1
1855 Male, age 76, left hemisphere 27.5
1898 Male, age 80, left hemisphere 24.7
2621 Female, age 67, right hemisphere 22.2
2148 Female, age 91, left hemisphere 20.1
Dentate gyrus
nTPM: 24.9
2530 Female, age 94, left hemisphere 33.2
2528 Male, age 74, both hemispheres 30.4
2010 Male, age 76, both hemispheres 30.3
2246 Female, age 85, both hemispheres 20.1
1927 Female, age 91, both hemispheres 17.9
2531 Female, age 67, both hemispheres 17.8
Entorhinal gyrus
nTPM: 18.3
2117 Female, age 91, right hemisphere 28.5
1787 Male, age 76, left hemisphere 20.0
1938 Female, age 85, left hemisphere 19.7
2764 Male, age 80, right hemisphere 15.7
2686 Male, age 75, right hemisphere 13.6
2613 Female, age 94, left hemisphere 12.1
Hippocampus, CA1
nTPM: 20.1
2527 Male, age 74, both hemispheres 23.8
1873 Female, age 85, both hemispheres 22.5
2082 Female, age 91, right hemisphere 20.7
2045 Male, age 76, both hemispheres 19.8
2749 Male, age 80, left hemisphere 13.6
Hippocampus, CA2
nTPM: 24.8
2249 Male, age 74, both hemispheres 33.3
1940 Female, age 85, left hemisphere 26.0
1963 Male, age 80, left hemisphere 24.2
2437 Female, age 94, left hemisphere 23.6
2113 Female, age 91, right hemisphere 22.2
1892 Male, age 76, both hemispheres 19.7
Hippocampus, CA3
nTPM: 22.0
1891 Female, age 85, both hemispheres 29.7
1867 Male, age 76, both hemispheres 27.2
2436 Male, age 74, both hemispheres 25.9
2620 Female, age 94, left hemisphere 17.2
2137 Male, age 80, left hemisphere 17.1
2861 Female, age 67, both hemispheres 14.9
Parahippocampal cortex
nTPM: 18.5
2018 Male, age 76, both hemispheres 29.8
1990 Female, age 91, right hemisphere 21.1
2532 Female, age 72, left hemisphere 18.9
1933 Female, age 85, both hemispheres 18.6
2245 Female, age 91, both hemispheres 18.3
1850 Male, age 80, both hemispheres 17.9
2692 Male, age 74, both hemispheres 17.1
2693 Female, age 94, both hemispheres 17.0
2250 Female, age 67, right hemisphere 15.6
2622 Female, age 67, right hemisphere 11.2
Perirhinal gyrus
nTPM: 16.1
2848 Male, age 76, right hemisphere 17.9
1841 Female, age 85, right hemisphere 17.7
2521 Female, age 94, right hemisphere 16.6
1847 Female, age 91, left hemisphere 14.2
1794 Male, age 80, right hemisphere 13.8
Subiculum
nTPM: 27.8
2042 Male, age 76, both hemispheres 41.8
1901 Male, age 80, both hemispheres 30.1
2729 Female, age 91, right hemisphere 26.8
1977 Female, age 85, both hemispheres 25.1
2438 Female, age 94, left hemisphere 22.0
2619 Male, age 74, both hemispheres 20.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.7
Samples: 197

Max nTPM: 88.7
Min nTPM: 12.6
Std nTPM: 16.2
Median nTPM: 35.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 88.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 85.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 81.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 79.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 75.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 75.3
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 73.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 73.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 70.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 70.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 69.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.9
FF:10153-102I9 76 years, female 41.4
FF:10169-103B7 60 years, female 40.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Subiculum
nTPM: 10.8
Samples: 4

Max nTPM: 11.4
Min nTPM: 9.8
Sample A Female 9.8
Sample B Female 11.4
Sample C Male 10.4
Sample D Male 11.4
Dorsal hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 15.6
Min nTPM: 8.3
Sample A Female 12.6
Sample B Female 10.7
Sample C Male 15.6
Sample D Male 8.3
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.8
Sample A Female 8.8
Sample B Female 9.6
Sample C Male 9.9
Sample D Male 9.0
Ventral hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 12.3
Min nTPM: 10.4
Sample A Female 12.3
Sample B Female 10.5
Sample C Male 11.2
Sample D Male 10.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.6
Samples: 4

Max nTPM: 47.4
Min nTPM: 37.3
Sample A Male 47.4
Sample B Male 42.7
Sample C Female 43.1
Sample D Female 37.3
Hippocampal formation
nTPM: 54.4
Samples: 4

Max nTPM: 62.8
Min nTPM: 47.5
Sample A Male 47.5
Sample B Male 52.0
Sample C Female 62.8
Sample D Female 55.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
69838712 Antisense, RP_050321_01_A10, Mouse strain C57BL/6J (56 days, male) 2.9
75233089 Antisense, RP_060220_02_G06, Mouse strain C57BL/6J (56 days, male) 1.3

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