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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
53.5
nTPM
Monaco:
185.9
nTPM
Schmiedel:
120.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.5
HPA sample
nTPM
gdT-cell nTPM: 14.1
Samples: 6
Max nTPM: 22.2
Min nTPM: 10.0
P10809_1007
10.0
P10809_1022
22.2
P10809_1041
10.7
P10809_1060
15.1
P10809_1077
10.0
P10809_1098
16.6
MAIT T-cell nTPM: 28.5
Samples: 6
Max nTPM: 41.6
Min nTPM: 17.4
P10809_1006
26.8
P10809_1024
41.6
P10809_1043
17.4
P10809_1062
23.0
P10809_1083
25.1
P10809_1097
37.1
Memory CD4 T-cell nTPM: 37.0
Samples: 6
Max nTPM: 52.7
Min nTPM: 24.1
P10809_1014
37.8
P10809_1026
52.7
P10809_1045
35.5
P10809_1064
24.1
P10809_1086
34.0
P10809_1113
37.9
Memory CD8 T-cell nTPM: 27.7
Samples: 5
Max nTPM: 33.0
Min nTPM: 20.0
P10809_1012
30.5
P10809_1027
32.6
P10809_1046
20.0
P10809_1065
22.4
P10809_1111
33.0
Naive CD4 T-cell nTPM: 53.5
Samples: 6
Max nTPM: 66.0
Min nTPM: 43.4
P10809_1015
66.0
P10809_1030
56.7
P10809_1049
43.4
P10809_1068
56.6
P10809_1085
48.3
P10809_1112
50.0
Naive CD8 T-cell nTPM: 35.3
Samples: 6
Max nTPM: 47.1
Min nTPM: 17.6
P10809_1016
47.1
P10809_1031
45.4
P10809_1050
37.1
P10809_1069
23.3
P10809_1087
17.6
P10809_1110
41.0
T-reg nTPM: 34.9
Samples: 6
Max nTPM: 45.7
Min nTPM: 29.1
P10809_1018
29.4
P10809_1037
31.1
P10809_1056
33.5
P10809_1075
29.1
P10809_1094
45.7
P10809_1106
40.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
185.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 123.8
Samples: 4
Max nTPM: 129.4
Min nTPM: 118.3
RHH5202_R3573
129.4
RHH5230_R3602
119.6
RHH5259_R3631
118.3
RHH5288_R3660
127.7
Effector memory CD8 T-cell nTPM: 78.1
Samples: 4
Max nTPM: 98.8
Min nTPM: 67.1
RHH5203_R3574
70.3
RHH5231_R3603
76.2
RHH5260_R3632
67.1
RHH5289_R3661
98.8
MAIT T-cell nTPM: 87.8
Samples: 4
Max nTPM: 100.5
Min nTPM: 57.8
RHH5233_R3605
99.4
RHH5205_R3576
100.5
RHH5262_R3634
57.8
RHH5297_R3663
93.4
Memory CD4 T-cell TFH nTPM: 144.1
Samples: 4
Max nTPM: 176.5
Min nTPM: 103.3
RHH5300_R3666
127.6
RHH5236_R3608
103.3
RHH5265_R3637
169.0
RHH5208_R3579
176.5
Memory CD4 T-cell Th1 nTPM: 131.0
Samples: 4
Max nTPM: 152.7
Min nTPM: 91.2
RHH5210_R3581
135.4
RHH5302_R3668
152.7
RHH5238_R3610
91.2
RHH5267_R3639
144.7
Memory CD4 T-cell Th1/Th17 nTPM: 119.7
Samples: 4
Max nTPM: 129.2
Min nTPM: 104.7
RHH5303_R3669
128.8
RHH5211_R3582
116.1
RHH5239_R3611
104.7
RHH5268_R3640
129.2
Memory CD4 T-cell Th17 nTPM: 144.8
Samples: 4
Max nTPM: 151.7
Min nTPM: 132.6
RHH5304_R3670
145.8
RHH5212_R3583
132.6
RHH5240_R3612
151.7
RHH5269_R3641
149.1
Memory CD4 T-cell Th2 nTPM: 185.1
Samples: 4
Max nTPM: 213.1
Min nTPM: 163.6
RHH5305_R3671
182.4
RHH5213_R3584
181.4
RHH5241_R3613
213.1
RHH5270_R3642
163.6
Naive CD4 T-cell nTPM: 185.9
Samples: 4
Max nTPM: 216.0
Min nTPM: 162.9
RHH5306_R3672
162.9
RHH5214_R3585
216.0
RHH5242_R3614
196.8
RHH5271_R3643
167.8
Naive CD8 T-cell nTPM: 174.9
Samples: 4
Max nTPM: 237.0
Min nTPM: 136.0
RHH5201_R3572
182.1
RHH5229_R3601
144.5
RHH5258_R3630
136.0
RHH5287_R3659
237.0
Non-Vd2 gdTCR nTPM: 76.3
Samples: 4
Max nTPM: 84.3
Min nTPM: 67.0
RHH5235_R3607
84.3
RHH5264_R3636
71.0
RHH5207_R3578
83.0
RHH5299_R3665
67.0
T-reg nTPM: 158.4
Samples: 4
Max nTPM: 178.1
Min nTPM: 146.6
RHH5301_R3667
151.0
RHH5237_R3609
146.6
RHH5266_R3638
157.9
RHH5209_R3580
178.1
Terminal effector memory CD4 T-cell nTPM: 76.0
Samples: 2
Max nTPM: 83.8
Min nTPM: 68.1
RHH5243_R3615
68.1
RHH5272_R3644
83.8
Terminal effector memory CD8 T-cell nTPM: 77.9
Samples: 4
Max nTPM: 102.4
Min nTPM: 63.2
RHH5232_R3604
102.4
RHH5204_R3575
63.2
RHH5261_R3633
74.7
RHH5296_R3662
71.1
Vd2 gdTCR nTPM: 76.0
Samples: 4
Max nTPM: 92.3
Min nTPM: 32.3
RHH5234_R3606
88.7
RHH5206_R3577
32.3
RHH5263_R3635
90.7
RHH5298_R3664
92.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
