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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
24.6
nTPM
Monaco:
135.6
nTPM
Schmiedel:
76.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.6
HPA sample
nTPM
gdT-cell nTPM: 19.3
Samples: 6
Max nTPM: 25.8
Min nTPM: 10.3
P10809_1007
18.3
P10809_1022
25.8
P10809_1041
15.1
P10809_1060
21.3
P10809_1077
10.3
P10809_1098
24.7
MAIT T-cell nTPM: 24.6
Samples: 6
Max nTPM: 31.2
Min nTPM: 16.6
P10809_1006
31.2
P10809_1024
17.4
P10809_1043
25.1
P10809_1062
29.7
P10809_1083
16.6
P10809_1097
27.6
Memory CD4 T-cell nTPM: 14.4
Samples: 6
Max nTPM: 19.5
Min nTPM: 11.5
P10809_1014
19.5
P10809_1026
11.8
P10809_1045
13.5
P10809_1064
11.5
P10809_1086
13.6
P10809_1113
16.6
Memory CD8 T-cell nTPM: 13.2
Samples: 5
Max nTPM: 18.4
Min nTPM: 7.1
P10809_1012
18.4
P10809_1027
12.3
P10809_1046
16.1
P10809_1065
7.1
P10809_1111
12.2
Naive CD4 T-cell nTPM: 1.4
Samples: 6
Max nTPM: 4.7
Min nTPM: 0.1
P10809_1015
1.3
P10809_1030
1.1
P10809_1049
0.1
P10809_1068
0.7
P10809_1085
4.7
P10809_1112
0.2
Naive CD8 T-cell nTPM: 4.2
Samples: 6
Max nTPM: 9.0
Min nTPM: 1.7
P10809_1016
1.7
P10809_1031
3.2
P10809_1050
3.2
P10809_1069
5.4
P10809_1087
9.0
P10809_1110
2.7
T-reg nTPM: 0.0
Samples: 6
Max nTPM: 0.1
Min nTPM: 0.0
P10809_1018
0.1
P10809_1037
0.0
P10809_1056
0.0
P10809_1075
0.0
P10809_1094
0.0
P10809_1106
0.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
135.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 88.8
Samples: 4
Max nTPM: 113.2
Min nTPM: 74.8
RHH5202_R3573
91.0
RHH5230_R3602
113.2
RHH5259_R3631
74.8
RHH5288_R3660
76.2
Effector memory CD8 T-cell nTPM: 40.5
Samples: 4
Max nTPM: 47.8
Min nTPM: 32.0
RHH5203_R3574
41.7
RHH5231_R3603
32.0
RHH5260_R3632
40.3
RHH5289_R3661
47.8
MAIT T-cell nTPM: 106.0
Samples: 4
Max nTPM: 145.9
Min nTPM: 83.2
RHH5233_R3605
83.2
RHH5205_R3576
145.9
RHH5262_R3634
106.7
RHH5297_R3663
88.1
Memory CD4 T-cell TFH nTPM: 36.2
Samples: 4
Max nTPM: 44.4
Min nTPM: 30.4
RHH5300_R3666
44.4
RHH5236_R3608
30.7
RHH5265_R3637
30.4
RHH5208_R3579
39.2
Memory CD4 T-cell Th1 nTPM: 60.7
Samples: 4
Max nTPM: 70.5
Min nTPM: 42.1
RHH5210_R3581
42.1
RHH5302_R3668
61.8
RHH5238_R3610
68.5
RHH5267_R3639
70.5
Memory CD4 T-cell Th1/Th17 nTPM: 113.1
Samples: 4
Max nTPM: 130.1
Min nTPM: 92.9
RHH5303_R3669
92.9
RHH5211_R3582
124.9
RHH5239_R3611
130.1
RHH5268_R3640
104.5
Memory CD4 T-cell Th17 nTPM: 101.8
Samples: 4
Max nTPM: 111.6
Min nTPM: 88.4
RHH5304_R3670
98.8
RHH5212_R3583
111.6
RHH5240_R3612
108.3
RHH5269_R3641
88.4
Memory CD4 T-cell Th2 nTPM: 75.3
Samples: 4
Max nTPM: 105.1
Min nTPM: 53.9
RHH5305_R3671
78.0
RHH5213_R3584
105.1
RHH5241_R3613
53.9
RHH5270_R3642
64.2
Naive CD4 T-cell nTPM: 6.2
Samples: 4
Max nTPM: 10.1
Min nTPM: 2.6
RHH5306_R3672
4.3
RHH5214_R3585
7.7
RHH5242_R3614
10.1
RHH5271_R3643
2.6
Naive CD8 T-cell nTPM: 3.4
Samples: 4
Max nTPM: 5.8
Min nTPM: 1.0
RHH5201_R3572
5.8
RHH5229_R3601
3.2
RHH5258_R3630
3.7
RHH5287_R3659
1.0
Non-Vd2 gdTCR nTPM: 23.9
Samples: 4
Max nTPM: 47.3
Min nTPM: 11.7
RHH5235_R3607
47.3
RHH5264_R3636
19.1
RHH5207_R3578
17.6
RHH5299_R3665
11.7
T-reg nTPM: 19.1
Samples: 4
Max nTPM: 24.1
Min nTPM: 13.4
RHH5301_R3667
13.4
RHH5237_R3609
18.9
RHH5266_R3638
20.1
RHH5209_R3580
24.1
Terminal effector memory CD4 T-cell nTPM: 63.3
Samples: 2
Max nTPM: 68.4
Min nTPM: 58.1
RHH5243_R3615
68.4
RHH5272_R3644
58.1
Terminal effector memory CD8 T-cell nTPM: 45.6
Samples: 4
Max nTPM: 78.6
Min nTPM: 21.4
RHH5232_R3604
41.0
RHH5204_R3575
41.4
RHH5261_R3633
78.6
RHH5296_R3662
21.4
Vd2 gdTCR nTPM: 135.6
Samples: 4
Max nTPM: 173.4
Min nTPM: 98.8
RHH5234_R3606
164.5
RHH5206_R3577
98.8
RHH5263_R3635
173.4
RHH5298_R3664
105.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
