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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
139.6
nTPM
Monaco:
64.5
nTPM
Schmiedel:
88.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
139.6
HPA sample
nTPM
gdT-cell nTPM: 88.7
Samples: 6
Max nTPM: 100.9
Min nTPM: 72.2
P10809_1007
74.5
P10809_1022
72.2
P10809_1041
88.7
P10809_1060
97.2
P10809_1077
100.9
P10809_1098
98.5
MAIT T-cell nTPM: 121.3
Samples: 6
Max nTPM: 143.0
Min nTPM: 88.7
P10809_1006
88.7
P10809_1024
143.0
P10809_1043
114.6
P10809_1062
116.8
P10809_1083
122.0
P10809_1097
142.4
Memory CD4 T-cell nTPM: 116.6
Samples: 6
Max nTPM: 127.6
Min nTPM: 102.4
P10809_1014
104.3
P10809_1026
126.7
P10809_1045
102.4
P10809_1064
121.9
P10809_1086
127.6
P10809_1113
116.9
Memory CD8 T-cell nTPM: 106.2
Samples: 5
Max nTPM: 121.9
Min nTPM: 84.5
P10809_1012
84.5
P10809_1027
114.4
P10809_1046
91.7
P10809_1065
118.4
P10809_1111
121.9
Naive CD4 T-cell nTPM: 99.8
Samples: 6
Max nTPM: 109.6
Min nTPM: 94.8
P10809_1015
94.8
P10809_1030
109.6
P10809_1049
97.1
P10809_1068
97.4
P10809_1085
99.6
P10809_1112
100.0
Naive CD8 T-cell nTPM: 101.4
Samples: 6
Max nTPM: 121.4
Min nTPM: 87.6
P10809_1016
94.1
P10809_1031
102.2
P10809_1050
101.6
P10809_1069
101.4
P10809_1087
121.4
P10809_1110
87.6
T-reg nTPM: 139.6
Samples: 6
Max nTPM: 169.1
Min nTPM: 88.5
P10809_1018
88.5
P10809_1037
169.1
P10809_1056
149.2
P10809_1075
160.0
P10809_1094
154.5
P10809_1106
116.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 35.6
Samples: 4
Max nTPM: 47.4
Min nTPM: 25.3
RHH5202_R3573
25.3
RHH5230_R3602
31.8
RHH5259_R3631
37.8
RHH5288_R3660
47.4
Effector memory CD8 T-cell nTPM: 36.3
Samples: 4
Max nTPM: 41.2
Min nTPM: 29.3
RHH5203_R3574
41.2
RHH5231_R3603
29.3
RHH5260_R3632
35.2
RHH5289_R3661
39.3
MAIT T-cell nTPM: 41.9
Samples: 4
Max nTPM: 49.1
Min nTPM: 37.1
RHH5233_R3605
43.4
RHH5205_R3576
37.8
RHH5262_R3634
37.1
RHH5297_R3663
49.1
Memory CD4 T-cell TFH nTPM: 52.3
Samples: 4
Max nTPM: 73.1
Min nTPM: 33.5
RHH5300_R3666
51.4
RHH5236_R3608
73.1
RHH5265_R3637
33.5
RHH5208_R3579
51.3
Memory CD4 T-cell Th1 nTPM: 46.4
Samples: 4
Max nTPM: 69.7
Min nTPM: 27.6
RHH5210_R3581
27.6
RHH5302_R3668
69.7
RHH5238_R3610
50.1
RHH5267_R3639
38.0
Memory CD4 T-cell Th1/Th17 nTPM: 43.8
Samples: 4
Max nTPM: 69.3
Min nTPM: 25.7
RHH5303_R3669
69.3
RHH5211_R3582
41.6
RHH5239_R3611
25.7
RHH5268_R3640
38.5
Memory CD4 T-cell Th17 nTPM: 37.9
Samples: 4
Max nTPM: 51.6
Min nTPM: 28.5
RHH5304_R3670
36.8
RHH5212_R3583
51.6
RHH5240_R3612
28.5
RHH5269_R3641
34.5
Memory CD4 T-cell Th2 nTPM: 43.4
Samples: 4
Max nTPM: 47.1
Min nTPM: 38.7
RHH5305_R3671
47.1
RHH5213_R3584
42.5
RHH5241_R3613
45.2
RHH5270_R3642
38.7
Naive CD4 T-cell nTPM: 32.0
Samples: 4
Max nTPM: 48.2
Min nTPM: 13.3
RHH5306_R3672
35.6
RHH5214_R3585
48.2
RHH5242_R3614
13.3
RHH5271_R3643
31.0
Naive CD8 T-cell nTPM: 25.4
Samples: 4
Max nTPM: 34.7
Min nTPM: 17.7
RHH5201_R3572
17.7
RHH5229_R3601
18.4
RHH5258_R3630
34.7
RHH5287_R3659
30.9
Non-Vd2 gdTCR nTPM: 40.1
Samples: 4
Max nTPM: 45.0
Min nTPM: 30.8
RHH5235_R3607
30.8
RHH5264_R3636
45.0
RHH5207_R3578
43.6
RHH5299_R3665
40.8
T-reg nTPM: 44.4
Samples: 4
Max nTPM: 51.9
Min nTPM: 37.8
RHH5301_R3667
51.9
RHH5237_R3609
45.6
RHH5266_R3638
37.8
RHH5209_R3580
42.4
Terminal effector memory CD4 T-cell nTPM: 29.2
Samples: 2
Max nTPM: 40.0
Min nTPM: 18.3
RHH5243_R3615
18.3
RHH5272_R3644
40.0
Terminal effector memory CD8 T-cell nTPM: 64.5
Samples: 4
Max nTPM: 132.5
Min nTPM: 35.8
RHH5232_R3604
39.2
RHH5204_R3575
132.5
RHH5261_R3633
50.6
RHH5296_R3662
35.8
Vd2 gdTCR nTPM: 60.5
Samples: 4
Max nTPM: 104.1
Min nTPM: 30.8
RHH5234_R3606
30.8
RHH5206_R3577
104.1
RHH5263_R3635
49.1
RHH5298_R3664
58.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
