HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:98.8 nTPM
HPA Brain:74.0 nTPM
GTEx:98.8 nTPM
FANTOM5:286.0 Scaled Tags Per Million
Pig:64.8 nTPM
Mouse:27.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044840
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.0
Sample id Sample description nTPM
Hippocampus
nTPM: 68.8
2529 Female, age 94, left hemisphere 90.0
1855 Male, age 76, left hemisphere 75.3
2148 Female, age 91, left hemisphere 64.9
1911 Female, age 85, right hemisphere 63.7
1898 Male, age 80, left hemisphere 63.4
2621 Female, age 67, right hemisphere 55.6
Dentate gyrus
nTPM: 59.9
2010 Male, age 76, both hemispheres 86.8
2528 Male, age 74, both hemispheres 78.3
2246 Female, age 85, both hemispheres 68.8
1927 Female, age 91, both hemispheres 46.0
2531 Female, age 67, both hemispheres 40.6
2530 Female, age 94, left hemisphere 38.9
Entorhinal gyrus
nTPM: 57.3
1938 Female, age 85, left hemisphere 86.6
2117 Female, age 91, right hemisphere 64.0
1787 Male, age 76, left hemisphere 61.1
2613 Female, age 94, left hemisphere 54.3
2686 Male, age 75, right hemisphere 39.4
2764 Male, age 80, right hemisphere 38.7
Hippocampus, CA1
nTPM: 69.4
2527 Male, age 74, both hemispheres 113.1
2082 Female, age 91, right hemisphere 76.6
2045 Male, age 76, both hemispheres 72.7
1873 Female, age 85, both hemispheres 58.3
2749 Male, age 80, left hemisphere 26.5
Hippocampus, CA2
nTPM: 64.2
2249 Male, age 74, both hemispheres 105.8
2113 Female, age 91, right hemisphere 79.4
1940 Female, age 85, left hemisphere 76.3
2437 Female, age 94, left hemisphere 49.5
1892 Male, age 76, both hemispheres 42.3
1963 Male, age 80, left hemisphere 32.2
Hippocampus, CA3
nTPM: 59.0
2436 Male, age 74, both hemispheres 87.8
1891 Female, age 85, both hemispheres 70.2
1867 Male, age 76, both hemispheres 65.9
2620 Female, age 94, left hemisphere 51.5
2137 Male, age 80, left hemisphere 39.7
2861 Female, age 67, both hemispheres 39.0
Parahippocampal cortex
nTPM: 62.3
2692 Male, age 74, both hemispheres 79.7
2018 Male, age 76, both hemispheres 78.7
2250 Female, age 67, right hemisphere 73.0
1933 Female, age 85, both hemispheres 71.8
2622 Female, age 67, right hemisphere 64.1
1990 Female, age 91, right hemisphere 58.9
1850 Male, age 80, both hemispheres 55.1
2245 Female, age 91, both hemispheres 50.7
2693 Female, age 94, both hemispheres 47.5
2532 Female, age 72, left hemisphere 43.9
Perirhinal gyrus
nTPM: 55.3
1847 Female, age 91, left hemisphere 72.2
2521 Female, age 94, right hemisphere 59.1
1794 Male, age 80, right hemisphere 55.5
1841 Female, age 85, right hemisphere 48.8
2848 Male, age 76, right hemisphere 40.8
Subiculum
nTPM: 74.0
2438 Female, age 94, left hemisphere 109.4
2619 Male, age 74, both hemispheres 86.5
2729 Female, age 91, right hemisphere 83.3
1901 Male, age 80, both hemispheres 59.6
2042 Male, age 76, both hemispheres 54.5
1977 Female, age 85, both hemispheres 50.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 98.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 98.8
Samples: 197

Max nTPM: 446.9
Min nTPM: 19.6
Std nTPM: 60.1
Median nTPM: 86.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 446.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 355.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 314.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 278.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 262.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 253.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 246.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 243.5
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 239.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 239.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 217.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 286.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 286.0
FF:10153-102I9 76 years, female 337.3
FF:10169-103B7 60 years, female 234.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.8
Pig sample Sample description nTPM
Subiculum
nTPM: 64.8
Samples: 4

Max nTPM: 71.3
Min nTPM: 54.4
Sample A Female 71.3
Sample B Female 69.2
Sample C Male 54.4
Sample D Male 64.1
Dorsal hippocampus
nTPM: 56.3
Samples: 4

Max nTPM: 63.4
Min nTPM: 47.1
Sample A Female 63.4
Sample B Female 55.1
Sample C Male 59.6
Sample D Male 47.1
Entorhinal cortex
nTPM: 59.1
Samples: 4

Max nTPM: 77.7
Min nTPM: 39.9
Sample A Female 39.9
Sample B Female 77.7
Sample C Male 73.6
Sample D Male 45.2
Ventral hippocampus
nTPM: 57.0
Samples: 4

Max nTPM: 61.3
Min nTPM: 48.1
Sample A Female 61.3
Sample B Female 61.3
Sample C Male 57.2
Sample D Male 48.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.2
Samples: 4

Max nTPM: 25.3
Min nTPM: 15.3
Sample A Male 16.2
Sample B Male 15.9
Sample C Female 25.3
Sample D Female 15.3
Hippocampal formation
nTPM: 27.2
Samples: 4

Max nTPM: 32.4
Min nTPM: 22.8
Sample A Male 22.8
Sample B Male 24.5
Sample C Female 32.4
Sample D Female 28.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
68269646 Antisense, RP_041129_02_A02, Mouse strain C57BL/6J (56 days, male) 0.2

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