HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:75.1 nTPM
HPA Brain:289.8 nTPM
GTEx:75.1 nTPM
FANTOM5:180.4 Scaled Tags Per Million
Pig:193.6 nTPM
Mouse:66.7 nTPM
Allen mouse:10.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007533
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 289.8
Sample id Sample description nTPM
Hippocampus
nTPM: 278.9
2148 Female, age 91, left hemisphere 301.6
2621 Female, age 67, right hemisphere 289.6
1911 Female, age 85, right hemisphere 287.7
2529 Female, age 94, left hemisphere 283.8
1898 Male, age 80, left hemisphere 275.9
1855 Male, age 76, left hemisphere 235.0
Dentate gyrus
nTPM: 271.3
2530 Female, age 94, left hemisphere 299.5
2010 Male, age 76, both hemispheres 292.4
2531 Female, age 67, both hemispheres 281.3
1927 Female, age 91, both hemispheres 272.0
2528 Male, age 74, both hemispheres 262.7
2246 Female, age 85, both hemispheres 219.7
Entorhinal gyrus
nTPM: 289.8
2117 Female, age 91, right hemisphere 323.7
2764 Male, age 80, right hemisphere 323.3
2613 Female, age 94, left hemisphere 291.2
1938 Female, age 85, left hemisphere 282.1
2686 Male, age 75, right hemisphere 267.4
1787 Male, age 76, left hemisphere 251.1
Hippocampus, CA1
nTPM: 266.9
2749 Male, age 80, left hemisphere 307.5
2045 Male, age 76, both hemispheres 293.1
1873 Female, age 85, both hemispheres 272.9
2527 Male, age 74, both hemispheres 248.0
2082 Female, age 91, right hemisphere 212.8
Hippocampus, CA2
nTPM: 237.9
1963 Male, age 80, left hemisphere 282.1
2437 Female, age 94, left hemisphere 273.9
1892 Male, age 76, both hemispheres 251.5
2249 Male, age 74, both hemispheres 224.2
2113 Female, age 91, right hemisphere 219.9
1940 Female, age 85, left hemisphere 175.7
Hippocampus, CA3
nTPM: 288.7
2620 Female, age 94, left hemisphere 339.0
2137 Male, age 80, left hemisphere 319.7
2861 Female, age 67, both hemispheres 317.9
1891 Female, age 85, both hemispheres 273.8
1867 Male, age 76, both hemispheres 266.2
2436 Male, age 74, both hemispheres 215.7
Parahippocampal cortex
nTPM: 237.8
2245 Female, age 91, both hemispheres 265.4
2532 Female, age 72, left hemisphere 263.2
2692 Male, age 74, both hemispheres 262.2
2018 Male, age 76, both hemispheres 257.8
1990 Female, age 91, right hemisphere 245.1
2622 Female, age 67, right hemisphere 241.2
2693 Female, age 94, both hemispheres 233.9
1850 Male, age 80, both hemispheres 224.5
1933 Female, age 85, both hemispheres 206.7
2250 Female, age 67, right hemisphere 177.6
Perirhinal gyrus
nTPM: 206.9
2848 Male, age 76, right hemisphere 285.3
1794 Male, age 80, right hemisphere 209.9
1847 Female, age 91, left hemisphere 196.1
1841 Female, age 85, right hemisphere 177.1
2521 Female, age 94, right hemisphere 166.3
Subiculum
nTPM: 277.0
1901 Male, age 80, both hemispheres 310.8
2042 Male, age 76, both hemispheres 306.2
2438 Female, age 94, left hemisphere 270.3
1977 Female, age 85, both hemispheres 264.5
2729 Female, age 91, right hemisphere 256.4
2619 Male, age 74, both hemispheres 253.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.1
Samples: 197

Max nTPM: 140.0
Min nTPM: 28.2
Std nTPM: 18.0
Median nTPM: 73.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 140.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 123.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 122.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 118.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 114.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 114.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 113.9
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 112.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 112.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 111.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 110.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 180.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 180.4
FF:10153-102I9 76 years, female 198.8
FF:10169-103B7 60 years, female 162.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 193.6
Pig sample Sample description nTPM
Subiculum
nTPM: 158.6
Samples: 4

Max nTPM: 221.9
Min nTPM: 112.9
Sample A Female 221.9
Sample B Female 138.1
Sample C Male 161.4
Sample D Male 112.9
Dorsal hippocampus
nTPM: 183.4
Samples: 4

Max nTPM: 198.5
Min nTPM: 163.5
Sample A Female 198.5
Sample B Female 174.6
Sample C Male 197.0
Sample D Male 163.5
Entorhinal cortex
nTPM: 185.1
Samples: 4

Max nTPM: 203.0
Min nTPM: 160.0
Sample A Female 202.9
Sample B Female 160.0
Sample C Male 174.5
Sample D Male 203.0
Ventral hippocampus
nTPM: 193.6
Samples: 4

Max nTPM: 264.3
Min nTPM: 155.0
Sample A Female 174.9
Sample B Female 155.0
Sample C Male 264.3
Sample D Male 180.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.7
Samples: 4

Max nTPM: 73.7
Min nTPM: 58.8
Sample A Male 73.7
Sample B Male 72.5
Sample C Female 61.7
Sample D Female 58.8
Hippocampal formation
nTPM: 60.8
Samples: 4

Max nTPM: 67.4
Min nTPM: 54.2
Sample A Male 54.2
Sample B Male 67.4
Sample C Female 56.0
Sample D Female 65.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
77620379 Antisense, RP_070205_01_D12, Mouse strain C57BL/6J (56 days, male) 14.0
77413698 Antisense, RP_070205_01_D12, Mouse strain C57BL/6J (56 days, male) 12.7
2424 Antisense, RP_Baylor_102930, Mouse strain C57BL/6J (56 days, male) 7.6
2423 Antisense, RP_Baylor_102930, Mouse strain C57BL/6J (56 days, male) 0.6

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