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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
255.0
nTPM
FANTOM5:
173.7
Scaled Tags Per Million
Pig:
151.3
nTPM
Allen mouse:
2.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
255.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 255.0
2301
Female, age 85, both hemispheres
279.4
1984
Male, age 76, both hemispheres
263.9
2188
Female, age 91, both hemispheres
248.6
2090
Male, age 80, both hemispheres
228.3
Dorsal cochlear nucleus nTPM: 222.7
2802
Male, age 74, right hemisphere
299.5
2378
Male, age 80, both hemispheres
243.7
2187
Female, age 91, both hemispheres
209.7
2370
Male, age 61, both hemispheres
192.6
2058
Male, age 76, both hemispheres
167.7
Dorsal tegmental nucleus nTPM: 198.8
2326
Male, age 74, both hemispheres
224.0
2083
Male, age 80, both hemispheres
200.1
1936
Male, age 76, left hemisphere
189.8
2358
Male, age 61, both hemispheres
181.4
Dorsolateral tegmental area nTPM: 186.7
2360
Male, age 74, both hemispheres
205.1
2337
Male, age 61, both hemispheres
196.3
2654
Male, age 80, both hemispheres
192.3
2751
Female, age 85, both hemispheres
180.3
2141
Male, age 76, both hemispheres
159.3
Kolliker-Fuse nucleus nTPM: 238.7
2793
Female, age 91, left hemisphere
284.2
2315
Male, age 76, right hemisphere
265.1
2163
Male, age 80, both hemispheres
166.8
Lateral lemniscal nuclei nTPM: 234.3
2169
Male, age 76, both hemispheres
259.0
2320
Female, age 91, left hemisphere
254.2
2746
Female, age 85, left hemisphere
238.8
2036
Male, age 80, both hemispheres
231.8
2453
Male, age 74, right hemisphere
187.8
Lateral parabrachial nucleus nTPM: 243.9
2792
Male, age 76, both hemispheres
301.1
2139
Female, age 85, right hemisphere
254.2
2013
Male, age 80, both hemispheres
245.3
2790
Male, age 61, both hemispheres
175.1
Lateral vestibular nucleus nTPM: 224.3
2311
Male, age 80, both hemispheres
250.2
2184
Male, age 76, both hemispheres
198.4
Locus coeruleus nTPM: 139.1
2720
Male, age 74, both hemispheres
164.6
2317
Female, age 72, unknown
161.2
2162
Male, age 80, both hemispheres
156.9
2123
Female, age 91, both hemispheres
138.7
2788
Male, age 74, unknown
120.6
2014
Male, age 55, unknown
117.0
1980
Male, age 76, both hemispheres
115.1
Medial parabrachial nucleus nTPM: 200.9
2463
Female, age 85, right hemisphere
226.3
2854
Male, age 80, both hemispheres
223.6
2170
Female, age 91, both hemispheres
200.9
2786
Male, age 76, both hemispheres
193.1
2156
Male, age 61, both hemispheres
160.5
Medial periolivary nuclei nTPM: 223.4
2063
Male, age 76, both hemispheres
244.9
2081
Male, age 80, both hemispheres
232.9
2458
Female, age 91, both hemispheres
227.4
2171
Female, age 85, both hemispheres
212.3
2791
Male, age 74, right hemisphere
199.6
Motor facial nucleus nTPM: 232.4
2697
Female, age 85, both hemispheres
269.7
2795
Female, age 91, both hemispheres
256.1
2327
Male, age 80, both hemispheres
249.4
2062
Male, age 76, both hemispheres
231.3
2365
Male, age 74, right hemisphere
200.1
2126
Male, age 61, both hemispheres
187.8
Motor trigeminal nucleus nTPM: 209.2
2321
Female, age 91, both hemispheres
238.2
2079
Male, age 80, both hemispheres
228.0
2560
Male, age 74, both hemispheres
210.4
2309
Male, age 76, both hemispheres
200.5
2335
Male, age 61, both hemispheres
169.1
Nuclei of the trapezoid body nTPM: 230.2
2166
Male, age 80, both hemispheres
257.9
2368
Female, age 91, both hemispheres
233.7
1983
Male, age 76, both hemispheres
228.3
2159
Male, age 61, both hemispheres
222.2
2735
Female, age 85, both hemispheres
208.8
Nucleus raphe magnus nTPM: 219.4
2328
Male, age 80, both hemispheres
268.5
2051
Male, age 76, both hemispheres
241.8
2459
Female, age 91, both hemispheres
218.4
2172
Female, age 85, both hemispheres
207.8
2455
Male, age 74, both hemispheres
195.6
2160
Male, age 61, both hemispheres
184.1
Paramedian reticular nucleus nTPM: 161.4
2050
Female, age 85, both hemispheres
171.2
2057
Male, age 80, both hemispheres
169.1
2052
Male, age 76, both hemispheres
165.8
2313
Male, age 61, both hemispheres
139.6
Pedunculopontine tegmental nucleus nTPM: 179.7
1921
Female, age 85, both hemispheres
187.3
2334
Male, age 80, both hemispheres
181.4
2338
Male, age 61, both hemispheres
170.4
Pontine nuclei nTPM: 232.9
1968
Male, age 76, left hemisphere
268.9
1863
Male, age 55, unknown
263.2
2319
Female, age 91, both hemispheres
255.3
2787
Female, age 85, both hemispheres
251.7
2115
Male, age 80, left hemisphere
246.3
2109
Female, age 72, unknown
232.4
2454
Male, age 74, left hemisphere
190.7
2727
Male, age 61, right hemisphere
154.5
Pontine raphe nucleus nTPM: 174.8
2122
Female, age 85, midline
190.9
2853
Male, age 76, midline
158.7
Posteroventral cochlear nucleus nTPM: 209.6
2135
Female, age 91, both hemispheres
253.3
2341
Male, age 80, both hemispheres
221.6
2371
Male, age 61, both hemispheres
215.9
2070
Male, age 76, both hemispheres
200.6
2752
Female, age 85, both hemispheres
156.5
Principal sensory trigeminal nucleus nTPM: 215.6
2367
Female, age 91, left hemisphere
240.5
2324
Male, age 76, both hemispheres
212.5
2008
Male, age 80, left hemisphere
209.5
2158
Male, age 61, both hemispheres
199.8
Reticular pontine nucleus, caudal nTPM: 235.7
2092
Male, age 76, both hemispheres
264.7
2332
Male, age 80, right hemisphere
254.1
2457
Female, age 91, both hemispheres
233.7
2559
Male, age 74, both hemispheres
190.4
Reticular pontine nucleus, oral nTPM: 208.2
2366
Female, age 91, both hemispheres
277.9
2012
Female, age 85, both hemispheres
208.3
2167
Male, age 76, both hemispheres
189.9
2361
Male, age 74, both hemispheres
187.2
1939
Male, age 80, both hemispheres
177.9
Reticulotegmental nucleus nTPM: 211.3
2322
Female, age 91, both hemispheres
222.5
2333
Male, age 80, both hemispheres
212.9
2452
Male, age 74, both hemispheres
211.3
2325
Male, age 76, both hemispheres
198.3
Spinal trigeminal nucleus, oral nTPM: 186.1
2164
Male, age 80, both hemispheres
194.0
1978
Male, age 76, both hemispheres
187.7
2737
Female, age 85, both hemispheres
176.5
Subcoeruleus area nTPM: 208.1
2089
Male, age 76, left hemisphere
262.3
2451
Male, age 74, both hemispheres
207.9
2369
Female, age 85, left hemisphere
207.3
1958
Male, age 80, both hemispheres
191.6
2323
Female, age 91, left hemisphere
171.5
Superior olive nTPM: 243.8
2020
Male, age 76, both hemispheres
278.4
2329
Male, age 80, right hemisphere
274.6
2561
Female, age 91, both hemispheres
244.8
1875
Female, age 85, both hemispheres
215.4
2364
Male, age 74, right hemisphere
205.9
Ventral periolivary nuclei nTPM: 241.5
2023
Male, age 76, both hemispheres
274.8
2165
Male, age 80, both hemispheres
245.4
2130
Female, age 85, both hemispheres
229.9
2794
Female, age 91, left hemisphere
215.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 220.9
1959
Male, age 76, both hemispheres
257.5
2456
Female, age 91, both hemispheres
244.4
2161
Male, age 80, both hemispheres
244.0
2840
Female, age 85, both hemispheres
220.8
2449
Male, age 74, both hemispheres
194.0
2359
Male, age 61, both hemispheres
164.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
151.3
Pig sample
Sample description
nTPM
Pons nTPM: 151.3
Samples: 4
Max nTPM: 228.1
Min nTPM: 112.0
Sample A
Female
143.2
Sample B
Female
112.0
Sample C
Male
121.9
Sample D
Male
228.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
