We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.0
nTPM
Monaco:
70.5
nTPM
Schmiedel:
99.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.0
HPA sample
nTPM
gdT-cell nTPM: 44.3
Samples: 6
Max nTPM: 71.5
Min nTPM: 21.9
P10809_1007
49.2
P10809_1022
49.4
P10809_1041
71.5
P10809_1060
21.9
P10809_1077
34.4
P10809_1098
39.1
MAIT T-cell nTPM: 49.2
Samples: 6
Max nTPM: 59.3
Min nTPM: 40.6
P10809_1006
59.3
P10809_1024
52.6
P10809_1043
42.4
P10809_1062
40.6
P10809_1083
44.8
P10809_1097
55.6
Memory CD4 T-cell nTPM: 40.7
Samples: 6
Max nTPM: 57.3
Min nTPM: 33.5
P10809_1014
57.3
P10809_1026
44.2
P10809_1045
41.8
P10809_1064
33.5
P10809_1086
33.7
P10809_1113
33.9
Memory CD8 T-cell nTPM: 43.5
Samples: 5
Max nTPM: 52.3
Min nTPM: 38.0
P10809_1012
52.3
P10809_1027
46.9
P10809_1046
38.0
P10809_1065
38.8
P10809_1111
41.3
Naive CD4 T-cell nTPM: 51.0
Samples: 6
Max nTPM: 70.4
Min nTPM: 34.9
P10809_1015
70.4
P10809_1030
45.9
P10809_1049
35.2
P10809_1068
68.0
P10809_1085
34.9
P10809_1112
51.6
Naive CD8 T-cell nTPM: 46.7
Samples: 6
Max nTPM: 68.1
Min nTPM: 35.1
P10809_1016
68.1
P10809_1031
41.8
P10809_1050
45.6
P10809_1069
43.2
P10809_1087
35.1
P10809_1110
46.3
T-reg nTPM: 39.2
Samples: 6
Max nTPM: 61.4
Min nTPM: 26.4
P10809_1018
36.6
P10809_1037
61.4
P10809_1056
26.4
P10809_1075
35.0
P10809_1094
36.2
P10809_1106
39.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
70.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 48.0
Samples: 4
Max nTPM: 54.0
Min nTPM: 43.3
RHH5202_R3573
45.9
RHH5230_R3602
48.6
RHH5259_R3631
54.0
RHH5288_R3660
43.3
Effector memory CD8 T-cell nTPM: 45.9
Samples: 4
Max nTPM: 58.0
Min nTPM: 36.1
RHH5203_R3574
46.0
RHH5231_R3603
43.5
RHH5260_R3632
58.0
RHH5289_R3661
36.1
MAIT T-cell nTPM: 44.8
Samples: 4
Max nTPM: 54.2
Min nTPM: 33.7
RHH5233_R3605
33.7
RHH5205_R3576
54.2
RHH5262_R3634
46.6
RHH5297_R3663
44.7
Memory CD4 T-cell TFH nTPM: 46.1
Samples: 4
Max nTPM: 58.1
Min nTPM: 25.7
RHH5300_R3666
25.7
RHH5236_R3608
50.1
RHH5265_R3637
50.5
RHH5208_R3579
58.1
Memory CD4 T-cell Th1 nTPM: 50.6
Samples: 4
Max nTPM: 60.7
Min nTPM: 31.7
RHH5210_R3581
60.7
RHH5302_R3668
31.7
RHH5238_R3610
54.4
RHH5267_R3639
55.5
Memory CD4 T-cell Th1/Th17 nTPM: 55.2
Samples: 4
Max nTPM: 62.4
Min nTPM: 42.7
RHH5303_R3669
42.7
RHH5211_R3582
62.4
RHH5239_R3611
61.2
RHH5268_R3640
54.3
Memory CD4 T-cell Th17 nTPM: 51.7
Samples: 4
Max nTPM: 73.7
Min nTPM: 33.1
RHH5304_R3670
41.7
RHH5212_R3583
58.3
RHH5240_R3612
73.7
RHH5269_R3641
33.1
Memory CD4 T-cell Th2 nTPM: 49.6
Samples: 4
Max nTPM: 64.9
Min nTPM: 42.8
RHH5305_R3671
47.2
RHH5213_R3584
64.9
RHH5241_R3613
42.8
RHH5270_R3642
43.6
Naive CD4 T-cell nTPM: 61.7
Samples: 4
Max nTPM: 68.1
Min nTPM: 51.3
RHH5306_R3672
51.3
RHH5214_R3585
68.1
RHH5242_R3614
64.7
RHH5271_R3643
62.7
Naive CD8 T-cell nTPM: 66.2
Samples: 4
Max nTPM: 70.0
Min nTPM: 63.7
RHH5201_R3572
63.9
RHH5229_R3601
67.3
RHH5258_R3630
70.0
RHH5287_R3659
63.7
Non-Vd2 gdTCR nTPM: 42.8
Samples: 4
Max nTPM: 60.4
Min nTPM: 30.4
RHH5235_R3607
60.4
RHH5264_R3636
45.7
RHH5207_R3578
34.7
RHH5299_R3665
30.4
T-reg nTPM: 62.9
Samples: 4
Max nTPM: 78.4
Min nTPM: 36.2
RHH5301_R3667
36.2
RHH5237_R3609
78.4
RHH5266_R3638
61.9
RHH5209_R3580
75.2
Terminal effector memory CD4 T-cell nTPM: 70.5
Samples: 2
Max nTPM: 79.5
Min nTPM: 61.5
RHH5243_R3615
79.5
RHH5272_R3644
61.5
Terminal effector memory CD8 T-cell nTPM: 45.2
Samples: 4
Max nTPM: 62.3
Min nTPM: 29.4
RHH5232_R3604
46.4
RHH5204_R3575
29.4
RHH5261_R3633
62.3
RHH5296_R3662
42.5
Vd2 gdTCR nTPM: 51.2
Samples: 4
Max nTPM: 64.4
Min nTPM: 34.9
RHH5234_R3606
51.2
RHH5206_R3577
54.3
RHH5263_R3635
64.4
RHH5298_R3664
34.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
