HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:10.9 nTPM
HPA Brain:32.3 nTPM
GTEx:10.9 nTPM
FANTOM5:65.1 Scaled Tags Per Million
Pig:35.3 nTPM
Mouse:46.1 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039915
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.3
Sample id Sample description nTPM
Hippocampus
nTPM: 29.8
1898 Male, age 80, left hemisphere 34.4
2148 Female, age 91, left hemisphere 30.7
2621 Female, age 67, right hemisphere 29.8
1855 Male, age 76, left hemisphere 29.1
2529 Female, age 94, left hemisphere 28.5
1911 Female, age 85, right hemisphere 26.0
Dentate gyrus
nTPM: 30.1
1927 Female, age 91, both hemispheres 34.3
2010 Male, age 76, both hemispheres 30.8
2531 Female, age 67, both hemispheres 30.1
2246 Female, age 85, both hemispheres 29.0
2528 Male, age 74, both hemispheres 28.4
2530 Female, age 94, left hemisphere 27.8
Entorhinal gyrus
nTPM: 28.5
1938 Female, age 85, left hemisphere 31.1
2764 Male, age 80, right hemisphere 29.9
1787 Male, age 76, left hemisphere 29.3
2613 Female, age 94, left hemisphere 28.3
2117 Female, age 91, right hemisphere 27.4
2686 Male, age 75, right hemisphere 25.1
Hippocampus, CA1
nTPM: 31.8
2749 Male, age 80, left hemisphere 41.3
1873 Female, age 85, both hemispheres 30.5
2527 Male, age 74, both hemispheres 29.5
2045 Male, age 76, both hemispheres 29.0
2082 Female, age 91, right hemisphere 28.7
Hippocampus, CA2
nTPM: 29.8
1892 Male, age 76, both hemispheres 35.1
1963 Male, age 80, left hemisphere 34.5
1940 Female, age 85, left hemisphere 28.4
2437 Female, age 94, left hemisphere 27.5
2113 Female, age 91, right hemisphere 27.0
2249 Male, age 74, both hemispheres 26.3
Hippocampus, CA3
nTPM: 31.1
2137 Male, age 80, left hemisphere 35.3
2436 Male, age 74, both hemispheres 33.0
1867 Male, age 76, both hemispheres 31.7
2620 Female, age 94, left hemisphere 30.1
1891 Female, age 85, both hemispheres 28.8
2861 Female, age 67, both hemispheres 28.0
Parahippocampal cortex
nTPM: 29.1
1850 Male, age 80, both hemispheres 34.4
1933 Female, age 85, both hemispheres 30.7
2532 Female, age 72, left hemisphere 30.7
2693 Female, age 94, both hemispheres 30.7
1990 Female, age 91, right hemisphere 28.9
2245 Female, age 91, both hemispheres 28.0
2250 Female, age 67, right hemisphere 27.9
2692 Male, age 74, both hemispheres 27.9
2622 Female, age 67, right hemisphere 26.2
2018 Male, age 76, both hemispheres 26.1
Perirhinal gyrus
nTPM: 32.3
1847 Female, age 91, left hemisphere 34.8
1794 Male, age 80, right hemisphere 34.5
1841 Female, age 85, right hemisphere 32.8
2521 Female, age 94, right hemisphere 31.9
2848 Male, age 76, right hemisphere 27.6
Subiculum
nTPM: 28.9
1901 Male, age 80, both hemispheres 31.4
1977 Female, age 85, both hemispheres 29.4
2729 Female, age 91, right hemisphere 29.4
2042 Male, age 76, both hemispheres 28.8
2619 Male, age 74, both hemispheres 27.6
2438 Female, age 94, left hemisphere 26.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.9
Samples: 197

Max nTPM: 17.5
Min nTPM: 6.8
Std nTPM: 2.1
Median nTPM: 10.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 17.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 17.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 16.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 16.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 16.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 15.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 15.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 15.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 15.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 14.9
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 14.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.1
FF:10169-103B7 60 years, female 83.0
FF:10153-102I9 76 years, female 47.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.3
Pig sample Sample description nTPM
Subiculum
nTPM: 35.2
Samples: 4

Max nTPM: 41.9
Min nTPM: 31.7
Sample A Female 41.9
Sample B Female 35.1
Sample C Male 32.1
Sample D Male 31.7
Dorsal hippocampus
nTPM: 34.0
Samples: 4

Max nTPM: 37.9
Min nTPM: 28.4
Sample A Female 37.7
Sample B Female 37.9
Sample C Male 31.9
Sample D Male 28.4
Entorhinal cortex
nTPM: 35.3
Samples: 4

Max nTPM: 37.4
Min nTPM: 32.5
Sample A Female 37.4
Sample B Female 35.9
Sample C Male 35.4
Sample D Male 32.5
Ventral hippocampus
nTPM: 34.4
Samples: 4

Max nTPM: 40.1
Min nTPM: 29.2
Sample A Female 33.0
Sample B Female 29.2
Sample C Male 40.1
Sample D Male 35.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.5
Samples: 4

Max nTPM: 47.5
Min nTPM: 40.9
Sample A Male 41.6
Sample B Male 44.0
Sample C Female 40.9
Sample D Female 47.5
Hippocampal formation
nTPM: 46.1
Samples: 4

Max nTPM: 48.6
Min nTPM: 41.1
Sample A Male 46.9
Sample B Male 47.6
Sample C Female 48.6
Sample D Female 41.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
71670707 Antisense, RP_050517_01_E10, Mouse strain C57BL/6J (56 days, male) 2.0
70194522 Antisense, RP_050517_01_E10, Mouse strain C57BL/6J (56 days, male) 1.6

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