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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
588.8
nTPM
Monaco:
694.6
nTPM
Schmiedel:
330.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
588.8
HPA sample
nTPM
gdT-cell nTPM: 297.4
Samples: 6
Max nTPM: 355.7
Min nTPM: 234.9
P10809_1007
234.9
P10809_1022
327.6
P10809_1041
355.7
P10809_1060
288.8
P10809_1077
266.4
P10809_1098
311.0
MAIT T-cell nTPM: 318.3
Samples: 6
Max nTPM: 402.3
Min nTPM: 248.1
P10809_1006
248.1
P10809_1024
402.3
P10809_1043
355.2
P10809_1062
279.5
P10809_1083
266.9
P10809_1097
357.6
Memory CD4 T-cell nTPM: 411.7
Samples: 6
Max nTPM: 543.3
Min nTPM: 317.7
P10809_1014
317.7
P10809_1026
543.3
P10809_1045
470.9
P10809_1064
359.3
P10809_1086
364.5
P10809_1113
414.5
Memory CD8 T-cell nTPM: 343.1
Samples: 5
Max nTPM: 369.3
Min nTPM: 301.4
P10809_1012
301.4
P10809_1027
362.3
P10809_1046
369.3
P10809_1065
320.8
P10809_1111
361.8
Naive CD4 T-cell nTPM: 460.9
Samples: 6
Max nTPM: 678.5
Min nTPM: 323.8
P10809_1015
323.8
P10809_1030
540.6
P10809_1049
678.5
P10809_1068
390.4
P10809_1085
410.9
P10809_1112
420.9
Naive CD8 T-cell nTPM: 366.2
Samples: 6
Max nTPM: 481.5
Min nTPM: 300.6
P10809_1016
301.7
P10809_1031
481.5
P10809_1050
379.8
P10809_1069
362.2
P10809_1087
300.6
P10809_1110
371.5
T-reg nTPM: 588.8
Samples: 6
Max nTPM: 829.6
Min nTPM: 435.3
P10809_1018
435.3
P10809_1037
579.7
P10809_1056
829.6
P10809_1075
471.0
P10809_1094
559.3
P10809_1106
657.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
694.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 553.2
Samples: 4
Max nTPM: 622.6
Min nTPM: 472.5
RHH5202_R3573
521.6
RHH5230_R3602
596.2
RHH5259_R3631
472.5
RHH5288_R3660
622.6
Effector memory CD8 T-cell nTPM: 538.0
Samples: 4
Max nTPM: 584.8
Min nTPM: 491.4
RHH5203_R3574
556.7
RHH5231_R3603
519.1
RHH5260_R3632
491.4
RHH5289_R3661
584.8
MAIT T-cell nTPM: 426.5
Samples: 4
Max nTPM: 482.2
Min nTPM: 399.6
RHH5233_R3605
399.6
RHH5205_R3576
408.8
RHH5262_R3634
415.3
RHH5297_R3663
482.2
Memory CD4 T-cell TFH nTPM: 694.6
Samples: 4
Max nTPM: 927.3
Min nTPM: 587.7
RHH5300_R3666
587.7
RHH5236_R3608
927.3
RHH5265_R3637
628.3
RHH5208_R3579
635.2
Memory CD4 T-cell Th1 nTPM: 578.1
Samples: 4
Max nTPM: 647.1
Min nTPM: 482.5
RHH5210_R3581
611.0
RHH5302_R3668
647.1
RHH5238_R3610
482.5
RHH5267_R3639
571.6
Memory CD4 T-cell Th1/Th17 nTPM: 588.0
Samples: 4
Max nTPM: 737.1
Min nTPM: 435.5
RHH5303_R3669
737.1
RHH5211_R3582
712.5
RHH5239_R3611
435.5
RHH5268_R3640
467.0
Memory CD4 T-cell Th17 nTPM: 572.3
Samples: 4
Max nTPM: 661.7
Min nTPM: 492.7
RHH5304_R3670
508.6
RHH5212_R3583
626.2
RHH5240_R3612
661.7
RHH5269_R3641
492.7
Memory CD4 T-cell Th2 nTPM: 570.2
Samples: 4
Max nTPM: 605.5
Min nTPM: 532.9
RHH5305_R3671
532.9
RHH5213_R3584
605.5
RHH5241_R3613
591.4
RHH5270_R3642
550.9
Naive CD4 T-cell nTPM: 680.4
Samples: 4
Max nTPM: 818.1
Min nTPM: 579.9
RHH5306_R3672
687.6
RHH5214_R3585
818.1
RHH5242_R3614
636.1
RHH5271_R3643
579.9
Naive CD8 T-cell nTPM: 602.7
Samples: 4
Max nTPM: 701.7
Min nTPM: 471.0
RHH5201_R3572
701.7
RHH5229_R3601
471.0
RHH5258_R3630
634.9
RHH5287_R3659
603.3
Non-Vd2 gdTCR nTPM: 440.3
Samples: 4
Max nTPM: 484.6
Min nTPM: 398.0
RHH5235_R3607
398.0
RHH5264_R3636
447.6
RHH5207_R3578
484.6
RHH5299_R3665
431.0
T-reg nTPM: 690.8
Samples: 4
Max nTPM: 910.7
Min nTPM: 609.3
RHH5301_R3667
614.0
RHH5237_R3609
910.7
RHH5266_R3638
609.3
RHH5209_R3580
629.0
Terminal effector memory CD4 T-cell nTPM: 464.3
Samples: 2
Max nTPM: 510.8
Min nTPM: 417.7
RHH5243_R3615
417.7
RHH5272_R3644
510.8
Terminal effector memory CD8 T-cell nTPM: 427.2
Samples: 4
Max nTPM: 470.4
Min nTPM: 388.5
RHH5232_R3604
441.3
RHH5204_R3575
408.4
RHH5261_R3633
388.5
RHH5296_R3662
470.4
Vd2 gdTCR nTPM: 477.5
Samples: 4
Max nTPM: 534.0
Min nTPM: 430.5
RHH5234_R3606
430.5
RHH5206_R3577
534.0
RHH5263_R3635
486.8
RHH5298_R3664
458.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.