HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:21.7 nTPM
HPA Brain:44.0 nTPM
GTEx:21.7 nTPM
FANTOM5:35.7 Scaled Tags Per Million
Pig:53.3 nTPM
Mouse:74.7 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050007Antibody HPA076784Antibody CAB033767
Glial cells Not detectedMediumNot detected
Neuronal cells HighHighLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.0
Sample id Sample description nTPM
Hippocampus
nTPM: 35.5
1898 Male, age 80, left hemisphere 42.3
2621 Female, age 67, right hemisphere 38.4
1855 Male, age 76, left hemisphere 34.7
2148 Female, age 91, left hemisphere 33.1
2529 Female, age 94, left hemisphere 32.9
1911 Female, age 85, right hemisphere 31.6
Dentate gyrus
nTPM: 32.8
1927 Female, age 91, both hemispheres 38.5
2010 Male, age 76, both hemispheres 36.1
2530 Female, age 94, left hemisphere 34.8
2528 Male, age 74, both hemispheres 30.1
2246 Female, age 85, both hemispheres 29.0
2531 Female, age 67, both hemispheres 28.4
Entorhinal gyrus
nTPM: 40.2
2764 Male, age 80, right hemisphere 44.4
1938 Female, age 85, left hemisphere 43.9
2613 Female, age 94, left hemisphere 43.8
2117 Female, age 91, right hemisphere 37.2
1787 Male, age 76, left hemisphere 37.1
2686 Male, age 75, right hemisphere 35.1
Hippocampus, CA1
nTPM: 36.0
2749 Male, age 80, left hemisphere 54.4
1873 Female, age 85, both hemispheres 37.9
2527 Male, age 74, both hemispheres 33.6
2045 Male, age 76, both hemispheres 28.0
2082 Female, age 91, right hemisphere 25.8
Hippocampus, CA2
nTPM: 35.1
1963 Male, age 80, left hemisphere 43.1
1892 Male, age 76, both hemispheres 37.6
2249 Male, age 74, both hemispheres 37.1
2437 Female, age 94, left hemisphere 32.2
1940 Female, age 85, left hemisphere 31.7
2113 Female, age 91, right hemisphere 28.7
Hippocampus, CA3
nTPM: 32.7
2137 Male, age 80, left hemisphere 37.1
1867 Male, age 76, both hemispheres 35.8
2436 Male, age 74, both hemispheres 33.2
1891 Female, age 85, both hemispheres 30.9
2861 Female, age 67, both hemispheres 29.9
2620 Female, age 94, left hemisphere 29.3
Parahippocampal cortex
nTPM: 39.0
1850 Male, age 80, both hemispheres 50.5
2532 Female, age 72, left hemisphere 41.7
1990 Female, age 91, right hemisphere 40.4
1933 Female, age 85, both hemispheres 40.2
2622 Female, age 67, right hemisphere 38.1
2018 Male, age 76, both hemispheres 37.7
2250 Female, age 67, right hemisphere 37.4
2245 Female, age 91, both hemispheres 37.1
2693 Female, age 94, both hemispheres 37.0
2692 Male, age 74, both hemispheres 30.4
Perirhinal gyrus
nTPM: 44.0
1794 Male, age 80, right hemisphere 48.9
1847 Female, age 91, left hemisphere 47.7
1841 Female, age 85, right hemisphere 47.0
2848 Male, age 76, right hemisphere 39.7
2521 Female, age 94, right hemisphere 36.5
Subiculum
nTPM: 36.0
2438 Female, age 94, left hemisphere 43.8
1977 Female, age 85, both hemispheres 38.1
1901 Male, age 80, both hemispheres 35.9
2619 Male, age 74, both hemispheres 34.1
2042 Male, age 76, both hemispheres 33.1
2729 Female, age 91, right hemisphere 31.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.7
Samples: 197

Max nTPM: 52.5
Min nTPM: 11.6
Std nTPM: 5.9
Median nTPM: 20.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 52.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 45.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 35.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 34.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 33.7
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 33.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 33.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 32.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 32.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 32.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 32.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.7
FF:10169-103B7 60 years, female 36.3
FF:10153-102I9 76 years, female 35.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.3
Pig sample Sample description nTPM
Subiculum
nTPM: 48.5
Samples: 4

Max nTPM: 59.3
Min nTPM: 43.4
Sample A Female 59.3
Sample B Female 44.5
Sample C Male 43.4
Sample D Male 46.9
Dorsal hippocampus
nTPM: 50.5
Samples: 4

Max nTPM: 62.0
Min nTPM: 39.4
Sample A Female 62.0
Sample B Female 44.1
Sample C Male 56.6
Sample D Male 39.4
Entorhinal cortex
nTPM: 53.3
Samples: 4

Max nTPM: 63.8
Min nTPM: 47.7
Sample A Female 50.7
Sample B Female 63.8
Sample C Male 51.1
Sample D Male 47.7
Ventral hippocampus
nTPM: 43.8
Samples: 4

Max nTPM: 47.1
Min nTPM: 36.6
Sample A Female 47.1
Sample B Female 36.6
Sample C Male 45.0
Sample D Male 46.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.7
Samples: 4

Max nTPM: 75.6
Min nTPM: 73.1
Sample A Male 75.1
Sample B Male 75.0
Sample C Female 73.1
Sample D Female 75.6
Hippocampal formation
nTPM: 63.3
Samples: 4

Max nTPM: 65.2
Min nTPM: 60.7
Sample A Male 65.2
Sample B Male 64.7
Sample C Female 60.7
Sample D Female 62.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
69817940 Antisense, RP_050510_04_A11, Mouse strain C57BL/6J (56 days, male) 6.4

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