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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
258.7
nTPM
Monaco:
238.0
nTPM
Schmiedel:
92.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
258.7
HPA sample
nTPM
gdT-cell nTPM: 205.1
Samples: 6
Max nTPM: 289.8
Min nTPM: 102.4
P10809_1007
102.4
P10809_1022
253.7
P10809_1041
289.8
P10809_1060
206.8
P10809_1077
184.5
P10809_1098
193.5
MAIT T-cell nTPM: 194.0
Samples: 6
Max nTPM: 250.2
Min nTPM: 90.8
P10809_1006
90.8
P10809_1024
231.1
P10809_1043
250.2
P10809_1062
214.9
P10809_1083
157.8
P10809_1097
219.3
Memory CD4 T-cell nTPM: 204.1
Samples: 6
Max nTPM: 251.9
Min nTPM: 110.0
P10809_1014
110.0
P10809_1026
246.6
P10809_1045
251.9
P10809_1064
217.8
P10809_1086
183.5
P10809_1113
214.5
Memory CD8 T-cell nTPM: 206.1
Samples: 5
Max nTPM: 250.8
Min nTPM: 133.4
P10809_1012
133.4
P10809_1027
221.0
P10809_1046
250.8
P10809_1065
206.9
P10809_1111
218.5
Naive CD4 T-cell nTPM: 177.6
Samples: 6
Max nTPM: 267.4
Min nTPM: 72.8
P10809_1015
72.8
P10809_1030
170.0
P10809_1049
267.4
P10809_1068
185.3
P10809_1085
184.8
P10809_1112
185.3
Naive CD8 T-cell nTPM: 175.6
Samples: 6
Max nTPM: 235.4
Min nTPM: 79.4
P10809_1016
79.4
P10809_1031
191.0
P10809_1050
196.6
P10809_1069
235.4
P10809_1087
182.4
P10809_1110
169.0
T-reg nTPM: 258.7
Samples: 6
Max nTPM: 385.6
Min nTPM: 155.9
P10809_1018
155.9
P10809_1037
228.8
P10809_1056
385.6
P10809_1075
256.5
P10809_1094
278.0
P10809_1106
247.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
238.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 183.0
Samples: 4
Max nTPM: 235.8
Min nTPM: 99.8
RHH5202_R3573
213.5
RHH5230_R3602
235.8
RHH5259_R3631
99.8
RHH5288_R3660
182.9
Effector memory CD8 T-cell nTPM: 238.0
Samples: 4
Max nTPM: 288.7
Min nTPM: 189.2
RHH5203_R3574
288.7
RHH5231_R3603
248.6
RHH5260_R3632
189.2
RHH5289_R3661
225.4
MAIT T-cell nTPM: 188.2
Samples: 4
Max nTPM: 231.6
Min nTPM: 168.0
RHH5233_R3605
231.6
RHH5205_R3576
168.5
RHH5262_R3634
168.0
RHH5297_R3663
184.8
Memory CD4 T-cell TFH nTPM: 189.1
Samples: 4
Max nTPM: 249.2
Min nTPM: 160.6
RHH5300_R3666
182.7
RHH5236_R3608
249.2
RHH5265_R3637
160.6
RHH5208_R3579
163.8
Memory CD4 T-cell Th1 nTPM: 157.4
Samples: 4
Max nTPM: 199.9
Min nTPM: 109.2
RHH5210_R3581
177.5
RHH5302_R3668
199.9
RHH5238_R3610
109.2
RHH5267_R3639
142.8
Memory CD4 T-cell Th1/Th17 nTPM: 173.8
Samples: 4
Max nTPM: 231.8
Min nTPM: 101.6
RHH5303_R3669
231.8
RHH5211_R3582
229.5
RHH5239_R3611
101.6
RHH5268_R3640
132.3
Memory CD4 T-cell Th17 nTPM: 162.2
Samples: 4
Max nTPM: 181.5
Min nTPM: 120.0
RHH5304_R3670
168.9
RHH5212_R3583
181.5
RHH5240_R3612
178.3
RHH5269_R3641
120.0
Memory CD4 T-cell Th2 nTPM: 193.7
Samples: 4
Max nTPM: 196.8
Min nTPM: 191.6
RHH5305_R3671
191.6
RHH5213_R3584
192.8
RHH5241_R3613
193.4
RHH5270_R3642
196.8
Naive CD4 T-cell nTPM: 155.8
Samples: 4
Max nTPM: 214.3
Min nTPM: 112.4
RHH5306_R3672
174.5
RHH5214_R3585
214.3
RHH5242_R3614
112.4
RHH5271_R3643
121.9
Naive CD8 T-cell nTPM: 133.6
Samples: 4
Max nTPM: 187.6
Min nTPM: 68.3
RHH5201_R3572
187.6
RHH5229_R3601
68.3
RHH5258_R3630
138.3
RHH5287_R3659
140.1
Non-Vd2 gdTCR nTPM: 214.1
Samples: 4
Max nTPM: 242.8
Min nTPM: 179.4
RHH5235_R3607
179.4
RHH5264_R3636
215.9
RHH5207_R3578
242.8
RHH5299_R3665
218.2
T-reg nTPM: 190.9
Samples: 4
Max nTPM: 291.7
Min nTPM: 145.0
RHH5301_R3667
165.8
RHH5237_R3609
291.7
RHH5266_R3638
145.0
RHH5209_R3580
160.9
Terminal effector memory CD4 T-cell nTPM: 202.0
Samples: 2
Max nTPM: 203.3
Min nTPM: 200.6
RHH5243_R3615
203.3
RHH5272_R3644
200.6
Terminal effector memory CD8 T-cell nTPM: 221.9
Samples: 4
Max nTPM: 258.2
Min nTPM: 194.1
RHH5232_R3604
228.9
RHH5204_R3575
206.5
RHH5261_R3633
194.1
RHH5296_R3662
258.2
Vd2 gdTCR nTPM: 204.7
Samples: 4
Max nTPM: 238.1
Min nTPM: 169.0
RHH5234_R3606
238.1
RHH5206_R3577
227.1
RHH5263_R3635
184.5
RHH5298_R3664
169.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.