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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
154.9
nTPM
Monaco:
627.0
nTPM
Schmiedel:
529.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
154.9
HPA sample
nTPM
gdT-cell nTPM: 2.1
Samples: 6
Max nTPM: 5.6
Min nTPM: 0.1
P10809_1007
1.2
P10809_1022
5.6
P10809_1041
4.5
P10809_1060
0.4
P10809_1077
0.5
P10809_1098
0.1
MAIT T-cell nTPM: 6.3
Samples: 6
Max nTPM: 11.0
Min nTPM: 2.6
P10809_1006
3.7
P10809_1024
11.0
P10809_1043
2.6
P10809_1062
7.7
P10809_1083
7.5
P10809_1097
5.4
Memory CD4 T-cell nTPM: 153.8
Samples: 6
Max nTPM: 179.4
Min nTPM: 134.5
P10809_1014
150.4
P10809_1026
179.4
P10809_1045
157.1
P10809_1064
145.3
P10809_1086
155.9
P10809_1113
134.5
Memory CD8 T-cell nTPM: 0.8
Samples: 5
Max nTPM: 2.2
Min nTPM: 0.1
P10809_1012
2.2
P10809_1027
0.2
P10809_1046
0.1
P10809_1065
0.1
P10809_1111
1.2
Naive CD4 T-cell nTPM: 128.5
Samples: 6
Max nTPM: 142.0
Min nTPM: 114.6
P10809_1015
138.0
P10809_1030
125.5
P10809_1049
125.2
P10809_1068
142.0
P10809_1085
114.6
P10809_1112
125.4
Naive CD8 T-cell nTPM: 0.7
Samples: 6
Max nTPM: 1.9
Min nTPM: 0.1
P10809_1016
0.4
P10809_1031
1.9
P10809_1050
0.1
P10809_1069
0.2
P10809_1087
0.8
P10809_1110
0.8
T-reg nTPM: 154.9
Samples: 6
Max nTPM: 196.0
Min nTPM: 127.2
P10809_1018
156.1
P10809_1037
196.0
P10809_1056
178.9
P10809_1075
132.8
P10809_1094
138.2
P10809_1106
127.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
627.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.4
Samples: 4
Max nTPM: 19.7
Min nTPM: 2.8
RHH5202_R3573
2.8
RHH5230_R3602
17.0
RHH5259_R3631
19.7
RHH5288_R3660
10.1
Effector memory CD8 T-cell nTPM: 13.0
Samples: 4
Max nTPM: 18.1
Min nTPM: 9.7
RHH5203_R3574
9.7
RHH5231_R3603
10.0
RHH5260_R3632
14.3
RHH5289_R3661
18.1
MAIT T-cell nTPM: 6.3
Samples: 4
Max nTPM: 12.2
Min nTPM: 0.1
RHH5233_R3605
4.5
RHH5205_R3576
8.4
RHH5262_R3634
0.1
RHH5297_R3663
12.2
Memory CD4 T-cell TFH nTPM: 437.3
Samples: 4
Max nTPM: 469.2
Min nTPM: 421.5
RHH5300_R3666
421.5
RHH5236_R3608
427.4
RHH5265_R3637
430.9
RHH5208_R3579
469.2
Memory CD4 T-cell Th1 nTPM: 474.5
Samples: 4
Max nTPM: 551.7
Min nTPM: 365.5
RHH5210_R3581
365.5
RHH5302_R3668
446.0
RHH5238_R3610
551.7
RHH5267_R3639
534.7
Memory CD4 T-cell Th1/Th17 nTPM: 552.2
Samples: 4
Max nTPM: 734.5
Min nTPM: 470.6
RHH5303_R3669
500.4
RHH5211_R3582
470.6
RHH5239_R3611
734.5
RHH5268_R3640
503.4
Memory CD4 T-cell Th17 nTPM: 540.1
Samples: 4
Max nTPM: 766.8
Min nTPM: 449.6
RHH5304_R3670
487.8
RHH5212_R3583
449.6
RHH5240_R3612
766.8
RHH5269_R3641
456.1
Memory CD4 T-cell Th2 nTPM: 520.4
Samples: 4
Max nTPM: 582.0
Min nTPM: 477.3
RHH5305_R3671
513.3
RHH5213_R3584
477.3
RHH5241_R3613
582.0
RHH5270_R3642
508.8
Naive CD4 T-cell nTPM: 403.8
Samples: 4
Max nTPM: 497.4
Min nTPM: 323.7
RHH5306_R3672
407.7
RHH5214_R3585
323.7
RHH5242_R3614
497.4
RHH5271_R3643
386.5
Naive CD8 T-cell nTPM: 1.6
Samples: 4
Max nTPM: 2.9
Min nTPM: 0.1
RHH5201_R3572
1.3
RHH5229_R3601
1.9
RHH5258_R3630
2.9
RHH5287_R3659
0.1
Non-Vd2 gdTCR nTPM: 1.8
Samples: 4
Max nTPM: 4.7
Min nTPM: 0.4
RHH5235_R3607
4.7
RHH5264_R3636
0.6
RHH5207_R3578
0.4
RHH5299_R3665
1.6
T-reg nTPM: 381.9
Samples: 4
Max nTPM: 418.6
Min nTPM: 331.4
RHH5301_R3667
379.8
RHH5237_R3609
418.6
RHH5266_R3638
397.9
RHH5209_R3580
331.4
Terminal effector memory CD4 T-cell nTPM: 627.0
Samples: 2
Max nTPM: 700.5
Min nTPM: 553.4
RHH5243_R3615
700.5
RHH5272_R3644
553.4
Terminal effector memory CD8 T-cell nTPM: 8.6
Samples: 4
Max nTPM: 30.0
Min nTPM: 0.9
RHH5232_R3604
30.0
RHH5204_R3575
1.2
RHH5261_R3633
2.3
RHH5296_R3662
0.9
Vd2 gdTCR nTPM: 6.9
Samples: 4
Max nTPM: 12.0
Min nTPM: 0.2
RHH5234_R3606
5.0
RHH5206_R3577
0.2
RHH5263_R3635
12.0
RHH5298_R3664
10.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
