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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
174.7
nTPM
Monaco:
661.5
nTPM
Schmiedel:
673.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
174.7
HPA sample
nTPM
gdT-cell nTPM: 136.9
Samples: 6
Max nTPM: 167.4
Min nTPM: 84.6
P10809_1007
84.6
P10809_1022
157.1
P10809_1041
167.4
P10809_1060
148.9
P10809_1077
130.0
P10809_1098
133.5
MAIT T-cell nTPM: 174.7
Samples: 6
Max nTPM: 224.4
Min nTPM: 143.9
P10809_1006
143.9
P10809_1024
224.4
P10809_1043
158.4
P10809_1062
174.8
P10809_1083
166.8
P10809_1097
180.0
Memory CD4 T-cell nTPM: 84.0
Samples: 6
Max nTPM: 104.3
Min nTPM: 66.6
P10809_1014
72.8
P10809_1026
66.6
P10809_1045
91.0
P10809_1064
76.0
P10809_1086
104.3
P10809_1113
93.1
Memory CD8 T-cell nTPM: 152.4
Samples: 5
Max nTPM: 180.7
Min nTPM: 126.8
P10809_1012
126.8
P10809_1027
180.7
P10809_1046
164.0
P10809_1065
130.8
P10809_1111
159.7
Naive CD4 T-cell nTPM: 27.9
Samples: 6
Max nTPM: 41.6
Min nTPM: 19.9
P10809_1015
19.9
P10809_1030
30.2
P10809_1049
41.6
P10809_1068
23.0
P10809_1085
30.1
P10809_1112
22.6
Naive CD8 T-cell nTPM: 72.3
Samples: 6
Max nTPM: 129.1
Min nTPM: 16.8
P10809_1016
16.8
P10809_1031
60.0
P10809_1050
86.3
P10809_1069
95.3
P10809_1087
129.1
P10809_1110
46.4
T-reg nTPM: 79.2
Samples: 6
Max nTPM: 98.6
Min nTPM: 57.5
P10809_1018
57.5
P10809_1037
71.0
P10809_1056
98.6
P10809_1075
82.2
P10809_1094
92.8
P10809_1106
72.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
661.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 529.3
Samples: 4
Max nTPM: 598.0
Min nTPM: 410.3
RHH5202_R3573
598.0
RHH5230_R3602
552.9
RHH5259_R3631
555.8
RHH5288_R3660
410.3
Effector memory CD8 T-cell nTPM: 661.5
Samples: 4
Max nTPM: 732.3
Min nTPM: 620.8
RHH5203_R3574
732.3
RHH5231_R3603
655.5
RHH5260_R3632
637.5
RHH5289_R3661
620.8
MAIT T-cell nTPM: 645.9
Samples: 4
Max nTPM: 732.7
Min nTPM: 549.2
RHH5233_R3605
732.7
RHH5205_R3576
701.6
RHH5262_R3634
600.1
RHH5297_R3663
549.2
Memory CD4 T-cell TFH nTPM: 504.7
Samples: 4
Max nTPM: 541.6
Min nTPM: 451.7
RHH5300_R3666
451.7
RHH5236_R3608
541.6
RHH5265_R3637
524.0
RHH5208_R3579
501.3
Memory CD4 T-cell Th1 nTPM: 326.4
Samples: 4
Max nTPM: 353.9
Min nTPM: 314.4
RHH5210_R3581
315.3
RHH5302_R3668
314.4
RHH5238_R3610
353.9
RHH5267_R3639
321.8
Memory CD4 T-cell Th1/Th17 nTPM: 336.5
Samples: 4
Max nTPM: 388.5
Min nTPM: 297.0
RHH5303_R3669
337.2
RHH5211_R3582
323.4
RHH5239_R3611
388.5
RHH5268_R3640
297.0
Memory CD4 T-cell Th17 nTPM: 268.9
Samples: 4
Max nTPM: 317.1
Min nTPM: 219.8
RHH5304_R3670
317.1
RHH5212_R3583
219.8
RHH5240_R3612
242.7
RHH5269_R3641
296.0
Memory CD4 T-cell Th2 nTPM: 190.6
Samples: 4
Max nTPM: 221.6
Min nTPM: 165.7
RHH5305_R3671
221.6
RHH5213_R3584
175.5
RHH5241_R3613
199.5
RHH5270_R3642
165.7
Naive CD4 T-cell nTPM: 168.5
Samples: 4
Max nTPM: 200.1
Min nTPM: 114.3
RHH5306_R3672
114.3
RHH5214_R3585
197.3
RHH5242_R3614
200.1
RHH5271_R3643
162.1
Naive CD8 T-cell nTPM: 165.6
Samples: 4
Max nTPM: 208.9
Min nTPM: 138.0
RHH5201_R3572
208.9
RHH5229_R3601
177.3
RHH5258_R3630
138.3
RHH5287_R3659
138.0
Non-Vd2 gdTCR nTPM: 538.6
Samples: 4
Max nTPM: 649.3
Min nTPM: 467.9
RHH5235_R3607
649.3
RHH5264_R3636
467.9
RHH5207_R3578
527.1
RHH5299_R3665
510.2
T-reg nTPM: 298.3
Samples: 4
Max nTPM: 374.9
Min nTPM: 250.7
RHH5301_R3667
250.7
RHH5237_R3609
314.7
RHH5266_R3638
253.0
RHH5209_R3580
374.9
Terminal effector memory CD4 T-cell nTPM: 482.2
Samples: 2
Max nTPM: 571.4
Min nTPM: 392.9
RHH5243_R3615
571.4
RHH5272_R3644
392.9
Terminal effector memory CD8 T-cell nTPM: 534.9
Samples: 4
Max nTPM: 614.6
Min nTPM: 464.5
RHH5232_R3604
614.6
RHH5204_R3575
571.7
RHH5261_R3633
464.5
RHH5296_R3662
488.6
Vd2 gdTCR nTPM: 534.8
Samples: 4
Max nTPM: 691.2
Min nTPM: 394.5
RHH5234_R3606
598.5
RHH5206_R3577
394.5
RHH5263_R3635
691.2
RHH5298_R3664
454.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
