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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
106.0
nTPM
Monaco:
159.4
nTPM
Schmiedel:
87.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
106.0
HPA sample
nTPM
gdT-cell nTPM: 106.0
Samples: 6
Max nTPM: 122.8
Min nTPM: 90.0
P10809_1007
90.0
P10809_1022
122.8
P10809_1041
99.7
P10809_1060
100.1
P10809_1077
114.1
P10809_1098
109.4
MAIT T-cell nTPM: 87.3
Samples: 6
Max nTPM: 109.8
Min nTPM: 74.4
P10809_1006
74.4
P10809_1024
83.3
P10809_1043
83.8
P10809_1062
109.8
P10809_1083
79.7
P10809_1097
93.0
Memory CD4 T-cell nTPM: 89.4
Samples: 6
Max nTPM: 97.4
Min nTPM: 77.2
P10809_1014
77.2
P10809_1026
97.4
P10809_1045
86.7
P10809_1064
90.8
P10809_1086
93.1
P10809_1113
91.1
Memory CD8 T-cell nTPM: 93.9
Samples: 5
Max nTPM: 110.0
Min nTPM: 84.5
P10809_1012
88.3
P10809_1027
100.8
P10809_1046
110.0
P10809_1065
84.5
P10809_1111
85.7
Naive CD4 T-cell nTPM: 75.8
Samples: 6
Max nTPM: 91.4
Min nTPM: 53.6
P10809_1015
53.6
P10809_1030
74.7
P10809_1049
63.9
P10809_1068
85.4
P10809_1085
91.4
P10809_1112
85.6
Naive CD8 T-cell nTPM: 80.2
Samples: 6
Max nTPM: 102.2
Min nTPM: 68.5
P10809_1016
69.3
P10809_1031
68.5
P10809_1050
75.5
P10809_1069
102.2
P10809_1087
79.5
P10809_1110
86.1
T-reg nTPM: 89.0
Samples: 6
Max nTPM: 105.3
Min nTPM: 61.3
P10809_1018
92.3
P10809_1037
76.4
P10809_1056
104.1
P10809_1075
94.3
P10809_1094
105.3
P10809_1106
61.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
159.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 113.2
Samples: 4
Max nTPM: 160.9
Min nTPM: 72.1
RHH5202_R3573
160.9
RHH5230_R3602
108.8
RHH5259_R3631
72.1
RHH5288_R3660
111.0
Effector memory CD8 T-cell nTPM: 159.4
Samples: 4
Max nTPM: 190.3
Min nTPM: 134.7
RHH5203_R3574
159.8
RHH5231_R3603
152.9
RHH5260_R3632
134.7
RHH5289_R3661
190.3
MAIT T-cell nTPM: 141.3
Samples: 4
Max nTPM: 167.1
Min nTPM: 115.3
RHH5233_R3605
128.3
RHH5205_R3576
115.3
RHH5262_R3634
167.1
RHH5297_R3663
154.5
Memory CD4 T-cell TFH nTPM: 132.5
Samples: 4
Max nTPM: 187.6
Min nTPM: 109.1
RHH5300_R3666
111.7
RHH5236_R3608
121.5
RHH5265_R3637
109.1
RHH5208_R3579
187.6
Memory CD4 T-cell Th1 nTPM: 111.4
Samples: 4
Max nTPM: 131.4
Min nTPM: 77.2
RHH5210_R3581
116.1
RHH5302_R3668
120.9
RHH5238_R3610
77.2
RHH5267_R3639
131.4
Memory CD4 T-cell Th1/Th17 nTPM: 137.6
Samples: 4
Max nTPM: 189.9
Min nTPM: 71.7
RHH5303_R3669
171.0
RHH5211_R3582
189.9
RHH5239_R3611
71.7
RHH5268_R3640
117.7
Memory CD4 T-cell Th17 nTPM: 130.9
Samples: 4
Max nTPM: 147.4
Min nTPM: 101.2
RHH5304_R3670
129.0
RHH5212_R3583
146.0
RHH5240_R3612
147.4
RHH5269_R3641
101.2
Memory CD4 T-cell Th2 nTPM: 139.5
Samples: 4
Max nTPM: 161.6
Min nTPM: 129.0
RHH5305_R3671
133.4
RHH5213_R3584
161.6
RHH5241_R3613
129.0
RHH5270_R3642
133.9
Naive CD4 T-cell nTPM: 107.7
Samples: 4
Max nTPM: 114.3
Min nTPM: 95.5
RHH5306_R3672
111.4
RHH5214_R3585
95.5
RHH5242_R3614
109.7
RHH5271_R3643
114.3
Naive CD8 T-cell nTPM: 109.9
Samples: 4
Max nTPM: 140.8
Min nTPM: 67.2
RHH5201_R3572
119.5
RHH5229_R3601
67.2
RHH5258_R3630
140.8
RHH5287_R3659
111.9
Non-Vd2 gdTCR nTPM: 154.5
Samples: 4
Max nTPM: 216.0
Min nTPM: 107.3
RHH5235_R3607
107.3
RHH5264_R3636
216.0
RHH5207_R3578
154.2
RHH5299_R3665
140.6
T-reg nTPM: 114.2
Samples: 4
Max nTPM: 138.1
Min nTPM: 84.7
RHH5301_R3667
132.6
RHH5237_R3609
138.1
RHH5266_R3638
84.7
RHH5209_R3580
101.2
Terminal effector memory CD4 T-cell nTPM: 144.8
Samples: 2
Max nTPM: 150.4
Min nTPM: 139.1
RHH5243_R3615
139.1
RHH5272_R3644
150.4
Terminal effector memory CD8 T-cell nTPM: 147.5
Samples: 4
Max nTPM: 184.4
Min nTPM: 125.5
RHH5232_R3604
184.4
RHH5204_R3575
141.5
RHH5261_R3633
125.5
RHH5296_R3662
138.5
Vd2 gdTCR nTPM: 130.9
Samples: 4
Max nTPM: 149.3
Min nTPM: 117.0
RHH5234_R3606
118.9
RHH5206_R3577
149.3
RHH5263_R3635
117.0
RHH5298_R3664
138.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
