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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
32.4
nTPM
Monaco:
188.3
nTPM
Schmiedel:
222.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.4
HPA sample
nTPM
gdT-cell nTPM: 31.9
Samples: 6
Max nTPM: 43.2
Min nTPM: 20.8
P10809_1007
41.0
P10809_1022
28.5
P10809_1041
20.8
P10809_1060
28.5
P10809_1077
29.1
P10809_1098
43.2
MAIT T-cell nTPM: 32.4
Samples: 6
Max nTPM: 64.1
Min nTPM: 17.1
P10809_1006
64.1
P10809_1024
17.1
P10809_1043
25.8
P10809_1062
32.1
P10809_1083
24.7
P10809_1097
30.7
Memory CD4 T-cell nTPM: 26.4
Samples: 6
Max nTPM: 46.9
Min nTPM: 17.1
P10809_1014
46.9
P10809_1026
31.3
P10809_1045
17.1
P10809_1064
18.3
P10809_1086
19.8
P10809_1113
24.9
Memory CD8 T-cell nTPM: 30.0
Samples: 5
Max nTPM: 54.5
Min nTPM: 19.8
P10809_1012
54.5
P10809_1027
19.8
P10809_1046
25.5
P10809_1065
22.5
P10809_1111
27.7
Naive CD4 T-cell nTPM: 25.2
Samples: 6
Max nTPM: 42.5
Min nTPM: 11.0
P10809_1015
42.5
P10809_1030
17.3
P10809_1049
11.0
P10809_1068
28.1
P10809_1085
23.0
P10809_1112
29.2
Naive CD8 T-cell nTPM: 26.3
Samples: 6
Max nTPM: 49.8
Min nTPM: 19.1
P10809_1016
49.8
P10809_1031
19.1
P10809_1050
20.6
P10809_1069
19.8
P10809_1087
23.0
P10809_1110
25.2
T-reg nTPM: 29.2
Samples: 6
Max nTPM: 70.8
Min nTPM: 8.3
P10809_1018
70.8
P10809_1037
27.6
P10809_1056
8.3
P10809_1075
19.2
P10809_1094
30.6
P10809_1106
18.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
188.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 166.3
Samples: 4
Max nTPM: 194.6
Min nTPM: 94.4
RHH5202_R3573
94.4
RHH5230_R3602
194.6
RHH5259_R3631
182.8
RHH5288_R3660
193.3
Effector memory CD8 T-cell nTPM: 142.7
Samples: 4
Max nTPM: 202.4
Min nTPM: 71.4
RHH5203_R3574
178.7
RHH5231_R3603
118.1
RHH5260_R3632
202.4
RHH5289_R3661
71.4
MAIT T-cell nTPM: 178.5
Samples: 4
Max nTPM: 223.2
Min nTPM: 152.0
RHH5233_R3605
152.0
RHH5205_R3576
223.2
RHH5262_R3634
163.0
RHH5297_R3663
175.6
Memory CD4 T-cell TFH nTPM: 130.0
Samples: 4
Max nTPM: 178.5
Min nTPM: 52.2
RHH5300_R3666
178.5
RHH5236_R3608
119.2
RHH5265_R3637
170.0
RHH5208_R3579
52.2
Memory CD4 T-cell Th1 nTPM: 169.7
Samples: 4
Max nTPM: 180.5
Min nTPM: 144.4
RHH5210_R3581
179.3
RHH5302_R3668
174.4
RHH5238_R3610
180.5
RHH5267_R3639
144.4
Memory CD4 T-cell Th1/Th17 nTPM: 159.1
Samples: 4
Max nTPM: 228.3
Min nTPM: 53.3
RHH5303_R3669
53.3
RHH5211_R3582
204.8
RHH5239_R3611
228.3
RHH5268_R3640
149.8
Memory CD4 T-cell Th17 nTPM: 188.3
Samples: 4
Max nTPM: 235.1
Min nTPM: 160.7
RHH5304_R3670
170.0
RHH5212_R3583
187.3
RHH5240_R3612
235.1
RHH5269_R3641
160.7
Memory CD4 T-cell Th2 nTPM: 174.3
Samples: 4
Max nTPM: 206.3
Min nTPM: 131.5
RHH5305_R3671
175.7
RHH5213_R3584
206.3
RHH5241_R3613
131.5
RHH5270_R3642
183.7
Naive CD4 T-cell nTPM: 143.4
Samples: 4
Max nTPM: 177.9
Min nTPM: 117.3
RHH5306_R3672
177.9
RHH5214_R3585
125.7
RHH5242_R3614
117.3
RHH5271_R3643
152.6
Naive CD8 T-cell nTPM: 140.7
Samples: 4
Max nTPM: 199.2
Min nTPM: 22.9
RHH5201_R3572
22.9
RHH5229_R3601
189.2
RHH5258_R3630
151.3
RHH5287_R3659
199.2
Non-Vd2 gdTCR nTPM: 160.1
Samples: 4
Max nTPM: 170.2
Min nTPM: 148.5
RHH5235_R3607
170.2
RHH5264_R3636
148.5
RHH5207_R3578
162.8
RHH5299_R3665
158.7
T-reg nTPM: 140.5
Samples: 4
Max nTPM: 158.0
Min nTPM: 116.0
RHH5301_R3667
140.8
RHH5237_R3609
116.0
RHH5266_R3638
147.2
RHH5209_R3580
158.0
Terminal effector memory CD4 T-cell nTPM: 173.4
Samples: 2
Max nTPM: 174.1
Min nTPM: 172.7
RHH5243_R3615
174.1
RHH5272_R3644
172.7
Terminal effector memory CD8 T-cell nTPM: 160.3
Samples: 4
Max nTPM: 229.1
Min nTPM: 90.7
RHH5232_R3604
172.2
RHH5204_R3575
149.0
RHH5261_R3633
229.1
RHH5296_R3662
90.7
Vd2 gdTCR nTPM: 162.2
Samples: 4
Max nTPM: 182.8
Min nTPM: 144.8
RHH5234_R3606
164.3
RHH5206_R3577
157.0
RHH5263_R3635
182.8
RHH5298_R3664
144.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
